Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.92■□□□□ 0.78
SSU72Q9NP77 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.92■□□□□ 0.78
SSU72Q9NP77 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 IRS3P-201ENST00000223076 1006 ntBASIC19.92■□□□□ 0.78
SSU72Q9NP77 AC091305.1-201ENST00000479476 895 ntBASIC19.92■□□□□ 0.78
SSU72Q9NP77 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.92■□□□□ 0.78
SSU72Q9NP77 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.92■□□□□ 0.78
SSU72Q9NP77 KRT18P20-201ENST00000548986 1279 ntBASIC19.92■□□□□ 0.78
SSU72Q9NP77 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.92■□□□□ 0.78
SSU72Q9NP77 AC106739.1-201ENST00000617035 715 ntBASIC19.92■□□□□ 0.78
SSU72Q9NP77 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.92■□□□□ 0.78
SSU72Q9NP77 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 RBM17P2-201ENST00000616397 1405 ntBASIC19.92■□□□□ 0.78
SSU72Q9NP77 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
SSU72Q9NP77 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SSU72Q9NP77 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.91■□□□□ 0.78
SSU72Q9NP77 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.91■□□□□ 0.78
SSU72Q9NP77 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.91■□□□□ 0.78
SSU72Q9NP77 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SSU72Q9NP77 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SSU72Q9NP77 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
SSU72Q9NP77 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.91■□□□□ 0.78
SSU72Q9NP77 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSU72Q9NP77 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
SSU72Q9NP77 LINC01465-201ENST00000408887 1940 ntBASIC19.9■□□□□ 0.78
SSU72Q9NP77 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.9■□□□□ 0.78
SSU72Q9NP77 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.9■□□□□ 0.78
SSU72Q9NP77 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 AC105265.2-201ENST00000467189 838 ntBASIC19.9■□□□□ 0.78
SSU72Q9NP77 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.9■□□□□ 0.78
SSU72Q9NP77 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.9■□□□□ 0.78
SSU72Q9NP77 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.9■□□□□ 0.78
SSU72Q9NP77 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.9■□□□□ 0.78
SSU72Q9NP77 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.9■□□□□ 0.78
SSU72Q9NP77 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 AL032819.2-201ENST00000624543 2162 ntBASIC19.9■□□□□ 0.78
SSU72Q9NP77 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.9■□□□□ 0.78
SSU72Q9NP77 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSU72Q9NP77 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
SSU72Q9NP77 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
SSU72Q9NP77 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSU72Q9NP77 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSU72Q9NP77 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.89■□□□□ 0.77
SSU72Q9NP77 PGM5P4-201ENST00000421970 445 ntBASIC19.89■□□□□ 0.77
SSU72Q9NP77 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSU72Q9NP77 PBX2P1-201ENST00000493219 1291 ntBASIC19.89■□□□□ 0.77
SSU72Q9NP77 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.89■□□□□ 0.77
SSU72Q9NP77 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.89■□□□□ 0.77
SSU72Q9NP77 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSU72Q9NP77 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSU72Q9NP77 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.89■□□□□ 0.77
SSU72Q9NP77 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.89■□□□□ 0.77
SSU72Q9NP77 AL138781.2-201ENST00000617896 1843 ntBASIC19.89■□□□□ 0.77
SSU72Q9NP77 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSU72Q9NP77 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSU72Q9NP77 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSU72Q9NP77 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.88■□□□□ 0.77
SSU72Q9NP77 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSU72Q9NP77 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSU72Q9NP77 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SSU72Q9NP77 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSU72Q9NP77 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSU72Q9NP77 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SSU72Q9NP77 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSU72Q9NP77 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.88■□□□□ 0.77
SSU72Q9NP77 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.88■□□□□ 0.77
SSU72Q9NP77 SLC7A5P1-201ENST00000568957 537 ntBASIC19.88■□□□□ 0.77
SSU72Q9NP77 AP001160.3-201ENST00000601484 763 ntBASIC19.88■□□□□ 0.77
SSU72Q9NP77 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.88■□□□□ 0.77
SSU72Q9NP77 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms