Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.75■□□□□ 0.75
POPDC3Q9HBV1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
POPDC3Q9HBV1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.75■□□□□ 0.75
POPDC3Q9HBV1 KRT16P6-202ENST00000425692 1426 ntBASIC19.75■□□□□ 0.75
POPDC3Q9HBV1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POPDC3Q9HBV1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POPDC3Q9HBV1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.75■□□□□ 0.75
POPDC3Q9HBV1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POPDC3Q9HBV1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 AC022517.1-201ENST00000592429 346 ntBASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 AC009237.14-201ENST00000609975 1594 ntBASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.74■□□□□ 0.75
POPDC3Q9HBV1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POPDC3Q9HBV1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 HLA-G-202ENST00000376815 851 ntBASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 HLA-G-203ENST00000376818 1127 ntBASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 AL355472.2-201ENST00000422958 438 ntBASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.72■□□□□ 0.75
POPDC3Q9HBV1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 AC023632.3-201ENST00000521633 145 ntBASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 AC005181.1-201ENST00000604782 1256 ntBASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
POPDC3Q9HBV1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms