Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.21■□□□□ 0.67
BRF2Q9HAW0 AL031963.3-201ENST00000606441 850 ntBASIC19.21■□□□□ 0.67
BRF2Q9HAW0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.2■□□□□ 0.66
BRF2Q9HAW0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 KRT8P20-201ENST00000423953 1409 ntBASIC19.2■□□□□ 0.66
BRF2Q9HAW0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 AC073111.5-205ENST00000641717 521 ntBASIC19.2■□□□□ 0.66
BRF2Q9HAW0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRF2Q9HAW0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.19■□□□□ 0.66
BRF2Q9HAW0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRF2Q9HAW0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 KRT16P6-202ENST00000425692 1426 ntBASIC19.18■□□□□ 0.66
BRF2Q9HAW0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 AC093787.1-201ENST00000450396 207 ntBASIC19.18■□□□□ 0.66
BRF2Q9HAW0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 C2orf69P4-201ENST00000565394 541 ntBASIC19.18■□□□□ 0.66
BRF2Q9HAW0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 AL137784.2-201ENST00000607332 1000 ntBASIC19.18■□□□□ 0.66
BRF2Q9HAW0 IKBKGP1-201ENST00000612193 1073 ntBASIC19.18■□□□□ 0.66
BRF2Q9HAW0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRF2Q9HAW0 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.18■□□□□ 0.66
BRF2Q9HAW0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 MIR935-201ENST00000401179 91 ntBASIC19.17■□□□□ 0.66
BRF2Q9HAW0 CDCA4P2-201ENST00000441182 718 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms