Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.33■■□□□ 1.01
NSUN3Q9H649 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NSUN3Q9H649 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NSUN3Q9H649 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NSUN3Q9H649 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
NSUN3Q9H649 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.33■■□□□ 1
NSUN3Q9H649 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
NSUN3Q9H649 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
NSUN3Q9H649 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
NSUN3Q9H649 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.32■■□□□ 1
NSUN3Q9H649 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
NSUN3Q9H649 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.32■■□□□ 1
NSUN3Q9H649 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.32■■□□□ 1
NSUN3Q9H649 CR392000.1-201ENST00000624770 1228 ntBASIC21.32■■□□□ 1
NSUN3Q9H649 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.32■■□□□ 1
NSUN3Q9H649 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.32■■□□□ 1
NSUN3Q9H649 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NSUN3Q9H649 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NSUN3Q9H649 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.31■■□□□ 1
NSUN3Q9H649 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NSUN3Q9H649 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
NSUN3Q9H649 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NSUN3Q9H649 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.31■■□□□ 1
NSUN3Q9H649 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NSUN3Q9H649 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.31■■□□□ 1
NSUN3Q9H649 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.31■■□□□ 1
NSUN3Q9H649 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.31■■□□□ 1
NSUN3Q9H649 KSR1P1-201ENST00000446298 240 ntBASIC21.31■■□□□ 1
NSUN3Q9H649 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.31■■□□□ 1
NSUN3Q9H649 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.31■■□□□ 1
NSUN3Q9H649 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.31■■□□□ 1
NSUN3Q9H649 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NSUN3Q9H649 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NSUN3Q9H649 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.31■■□□□ 1
NSUN3Q9H649 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
NSUN3Q9H649 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.31■■□□□ 1
NSUN3Q9H649 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NSUN3Q9H649 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.3■■□□□ 1
NSUN3Q9H649 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NSUN3Q9H649 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.3■■□□□ 1
NSUN3Q9H649 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NSUN3Q9H649 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NSUN3Q9H649 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.3■■□□□ 1
NSUN3Q9H649 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NSUN3Q9H649 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.3■■□□□ 1
NSUN3Q9H649 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.3■■□□□ 1
NSUN3Q9H649 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.3■■□□□ 1
NSUN3Q9H649 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.3■■□□□ 1
NSUN3Q9H649 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
NSUN3Q9H649 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.3■■□□□ 1
NSUN3Q9H649 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.3■■□□□ 1
NSUN3Q9H649 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
NSUN3Q9H649 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NSUN3Q9H649 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
NSUN3Q9H649 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.29■■□□□ 1
NSUN3Q9H649 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.29■■□□□ 1
NSUN3Q9H649 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.29■■□□□ 1
NSUN3Q9H649 NIFKP9-201ENST00000419265 221 ntBASIC21.29■■□□□ 1
NSUN3Q9H649 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.29■■□□□ 1
NSUN3Q9H649 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.29■■□□□ 1
NSUN3Q9H649 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.29■■□□□ 1
NSUN3Q9H649 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.29■■□□□ 1
NSUN3Q9H649 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.29■■□□□ 1
NSUN3Q9H649 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.29■■□□□ 1
NSUN3Q9H649 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
NSUN3Q9H649 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NSUN3Q9H649 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.28■■□□□ 1
NSUN3Q9H649 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NSUN3Q9H649 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NSUN3Q9H649 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
NSUN3Q9H649 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.28■■□□□ 1
NSUN3Q9H649 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NSUN3Q9H649 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NSUN3Q9H649 KRT16P1-201ENST00000399124 1418 ntBASIC21.28■■□□□ 1
NSUN3Q9H649 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NSUN3Q9H649 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms