Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPTBN4Q9H254 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPTBN4Q9H254 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTBN4Q9H254 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTBN4Q9H254 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTBN4Q9H254 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPTBN4Q9H254 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
SPTBN4Q9H254 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.34■□□□□ 0.69
SPTBN4Q9H254 AL356652.1-201ENST00000615962 565 ntBASIC19.34■□□□□ 0.69
SPTBN4Q9H254 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPTBN4Q9H254 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPTBN4Q9H254 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
SPTBN4Q9H254 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPTBN4Q9H254 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SPTBN4Q9H254 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPTBN4Q9H254 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.33■□□□□ 0.69
SPTBN4Q9H254 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.33■□□□□ 0.69
SPTBN4Q9H254 PRELID1P1-202ENST00000567272 903 ntBASIC19.33■□□□□ 0.69
SPTBN4Q9H254 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPTBN4Q9H254 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
SPTBN4Q9H254 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SPTBN4Q9H254 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SPTBN4Q9H254 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPTBN4Q9H254 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
SPTBN4Q9H254 AC092865.5-201ENST00000545435 363 ntBASIC19.33■□□□□ 0.68
SPTBN4Q9H254 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
SPTBN4Q9H254 AC092119.3-201ENST00000612618 583 ntBASIC19.33■□□□□ 0.68
SPTBN4Q9H254 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPTBN4Q9H254 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 CCR12P-201ENST00000446203 998 ntBASIC19.32■□□□□ 0.68
SPTBN4Q9H254 PRSS44-201ENST00000515154 1146 ntBASIC19.32■□□□□ 0.68
SPTBN4Q9H254 AL441883.1-201ENST00000566170 1045 ntBASIC19.32■□□□□ 0.68
SPTBN4Q9H254 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.32■□□□□ 0.68
SPTBN4Q9H254 BX640515.1-201ENST00000617215 977 ntBASIC19.32■□□□□ 0.68
SPTBN4Q9H254 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 AC106795.1-205ENST00000512851 1056 ntBASIC19.31■□□□□ 0.68
SPTBN4Q9H254 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.31■□□□□ 0.68
SPTBN4Q9H254 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTBN4Q9H254 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SPTBN4Q9H254 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTBN4Q9H254 MIR574-201ENST00000385209 96 ntBASIC19.3■□□□□ 0.68
SPTBN4Q9H254 MIR1233-2-201ENST00000408138 82 ntBASIC19.3■□□□□ 0.68
SPTBN4Q9H254 MIR1233-1-201ENST00000408722 82 ntBASIC19.3■□□□□ 0.68
SPTBN4Q9H254 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTBN4Q9H254 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTBN4Q9H254 HLA-A-201ENST00000376802 1334 ntBASIC19.3■□□□□ 0.68
SPTBN4Q9H254 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.3■□□□□ 0.68
SPTBN4Q9H254 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SPTBN4Q9H254 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
SPTBN4Q9H254 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPTBN4Q9H254 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 AL031432.5-201ENST00000641059 760 ntBASIC19.29■□□□□ 0.68
SPTBN4Q9H254 AF228730.7-201ENST00000641842 219 ntBASIC19.29■□□□□ 0.68
SPTBN4Q9H254 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPTBN4Q9H254 AC140113.3-201ENST00000605663 199 ntBASIC19.29■□□□□ 0.68
SPTBN4Q9H254 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 AL023973.1-201ENST00000624619 620 ntBASIC19.28■□□□□ 0.68
SPTBN4Q9H254 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms