Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 AL158211.5-201ENST00000623583 2518 ntBASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 AC105265.2-201ENST00000467189 838 ntBASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 KRT18P20-201ENST00000548986 1279 ntBASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 AP001160.3-201ENST00000601484 763 ntBASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 AC104187.1-201ENST00000607510 612 ntBASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD4Q9H0A8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 AC125437.2-201ENST00000625180 2167 ntBASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 AC018445.3-201ENST00000624177 1945 ntBASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 AC243732.1-201ENST00000612648 864 ntBASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD4Q9H0A8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 LINC02228-203ENST00000641970 1355 ntBASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 BX323043.1-201ENST00000641006 1765 ntBASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 RNF165-205ENST00000588679 2904 ntBASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 AC120498.9-201ENST00000339021 3867 ntBASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 AC027612.3-201ENST00000413684 1047 ntBASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 BX119927.1-201ENST00000636596 1552 ntBASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD4Q9H0A8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 AC091799.1-201ENST00000422823 811 ntBASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms