Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 MTDHP2-201ENST00000601468 714 ntBASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 DPP3P2-201ENST00000416030 1696 ntBASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.65■□□□□ 0.42
SLIRPQ9GZT3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.64■□□□□ 0.42
SLIRPQ9GZT3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.64■□□□□ 0.42
SLIRPQ9GZT3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLIRPQ9GZT3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.64■□□□□ 0.42
SLIRPQ9GZT3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLIRPQ9GZT3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 AC068880.1-201ENST00000507289 2297 ntBASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLIRPQ9GZT3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 AC004987.1-201ENST00000428627 508 ntBASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 ATP5G2P3-201ENST00000429083 425 ntBASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 BX664725.1-201ENST00000438252 379 ntBASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.63■□□□□ 0.41
SLIRPQ9GZT3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms