Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 INGX-201ENST00000359239 846 ntBASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 SLC25A1P4-201ENST00000567977 778 ntBASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CNTNAP3Q9BZ76 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 LINC00526-201ENST00000581067 1875 ntBASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CNTNAP3Q9BZ76 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CNTNAP3Q9BZ76 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.14■□□□□ 0.66
CNTNAP3Q9BZ76 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 AC092183.1-201ENST00000469884 875 ntBASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 AL121829.2-201ENST00000620908 328 ntBASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3Q9BZ76 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 AL671277.2-201ENST00000458060 996 ntBASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 AC111152.3-201ENST00000569699 673 ntBASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 AL138966.2-201ENST00000621997 464 ntBASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CNTNAP3Q9BZ76 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms