Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPPED1Q9BRF8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 MIR638-201ENST00000385237 100 ntBASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 PTBP1P-201ENST00000554374 1601 ntBASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.85■□□□□ 0.61
CPPED1Q9BRF8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.84■□□□□ 0.61
CPPED1Q9BRF8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CPPED1Q9BRF8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.83■□□□□ 0.61
CPPED1Q9BRF8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.83■□□□□ 0.61
CPPED1Q9BRF8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPPED1Q9BRF8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.83■□□□□ 0.61
CPPED1Q9BRF8 AP000974.1-201ENST00000623909 2387 ntBASIC18.83■□□□□ 0.61
CPPED1Q9BRF8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPPED1Q9BRF8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 AC009237.14-201ENST00000609975 1594 ntBASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPPED1Q9BRF8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.82■□□□□ 0.6
CPPED1Q9BRF8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.81■□□□□ 0.6
CPPED1Q9BRF8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPPED1Q9BRF8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms