Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
USB1Q9BQ65 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USB1Q9BQ65 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USB1Q9BQ65 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USB1Q9BQ65 KRT18P29-201ENST00000397031 1267 ntBASIC17.84■□□□□ 0.45
USB1Q9BQ65 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.84■□□□□ 0.45
USB1Q9BQ65 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
USB1Q9BQ65 AC026366.1-201ENST00000488803 879 ntBASIC17.84■□□□□ 0.45
USB1Q9BQ65 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.84■□□□□ 0.45
USB1Q9BQ65 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.84■□□□□ 0.45
USB1Q9BQ65 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
USB1Q9BQ65 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
USB1Q9BQ65 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USB1Q9BQ65 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
USB1Q9BQ65 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USB1Q9BQ65 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
USB1Q9BQ65 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.84■□□□□ 0.45
USB1Q9BQ65 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
USB1Q9BQ65 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
USB1Q9BQ65 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
USB1Q9BQ65 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
USB1Q9BQ65 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.83■□□□□ 0.45
USB1Q9BQ65 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
USB1Q9BQ65 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
USB1Q9BQ65 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USB1Q9BQ65 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USB1Q9BQ65 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USB1Q9BQ65 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.83■□□□□ 0.44
USB1Q9BQ65 ESRRAP1-201ENST00000400596 1257 ntBASIC17.83■□□□□ 0.44
USB1Q9BQ65 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.83■□□□□ 0.44
USB1Q9BQ65 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USB1Q9BQ65 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.83■□□□□ 0.44
USB1Q9BQ65 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USB1Q9BQ65 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USB1Q9BQ65 Z98882.1-201ENST00000622160 2253 ntBASIC17.83■□□□□ 0.44
USB1Q9BQ65 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.83■□□□□ 0.44
USB1Q9BQ65 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
USB1Q9BQ65 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
USB1Q9BQ65 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USB1Q9BQ65 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USB1Q9BQ65 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USB1Q9BQ65 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.82■□□□□ 0.44
USB1Q9BQ65 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USB1Q9BQ65 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USB1Q9BQ65 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USB1Q9BQ65 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.82■□□□□ 0.44
USB1Q9BQ65 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
USB1Q9BQ65 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.82■□□□□ 0.44
USB1Q9BQ65 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.82■□□□□ 0.44
USB1Q9BQ65 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
USB1Q9BQ65 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USB1Q9BQ65 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USB1Q9BQ65 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
USB1Q9BQ65 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.82■□□□□ 0.44
USB1Q9BQ65 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USB1Q9BQ65 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USB1Q9BQ65 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USB1Q9BQ65 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
USB1Q9BQ65 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
USB1Q9BQ65 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USB1Q9BQ65 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USB1Q9BQ65 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 AP003097.1-201ENST00000530657 1135 ntBASIC17.81■□□□□ 0.44
USB1Q9BQ65 PNMA6B-201ENST00000538162 1200 ntBASIC17.81■□□□□ 0.44
USB1Q9BQ65 MIR4651-201ENST00000582622 73 ntBASIC17.81■□□□□ 0.44
USB1Q9BQ65 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
USB1Q9BQ65 AC092368.3-202ENST00000574180 1591 ntBASIC17.81■□□□□ 0.44
USB1Q9BQ65 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.81■□□□□ 0.44
USB1Q9BQ65 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USB1Q9BQ65 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USB1Q9BQ65 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
USB1Q9BQ65 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USB1Q9BQ65 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
USB1Q9BQ65 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.8■□□□□ 0.44
USB1Q9BQ65 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USB1Q9BQ65 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
USB1Q9BQ65 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.8■□□□□ 0.44
USB1Q9BQ65 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USB1Q9BQ65 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.8■□□□□ 0.44
USB1Q9BQ65 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USB1Q9BQ65 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.8■□□□□ 0.44
USB1Q9BQ65 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.8■□□□□ 0.44
USB1Q9BQ65 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms