Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 AC087289.5-201ENST00000586076 3175 ntBASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NUDCD1Q96RS6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 AL020996.1-203ENST00000536896 2307 ntBASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 AL355472.2-201ENST00000422958 438 ntBASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 AL109923.1-201ENST00000618799 583 ntBASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUDCD1Q96RS6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 KRT18P68-201ENST00000392293 1000 ntBASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 SLC29A4P1-201ENST00000398760 971 ntBASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 AC104771.1-201ENST00000603335 964 ntBASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUDCD1Q96RS6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 ID1-201ENST00000376105 1233 ntBASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 AC007225.1-201ENST00000566331 1836 ntBASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 AFG3L1P-217ENST00000557444 2447 ntBASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUDCD1Q96RS6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 MIPEPP3-201ENST00000412105 444 ntBASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 HLA-L-209ENST00000420110 1011 ntBASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 AL356652.1-201ENST00000615962 565 ntBASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 FP700111.2-201ENST00000619190 1892 ntBASIC20.67■□□□□ 0.9
NUDCD1Q96RS6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms