Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TWNKQ96RR1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TWNKQ96RR1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.34■■□□□ 1.01
TWNKQ96RR1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
TWNKQ96RR1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TWNKQ96RR1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.34■■□□□ 1.01
TWNKQ96RR1 SOX15-203ENST00000570788 1093 ntBASIC21.34■■□□□ 1.01
TWNKQ96RR1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.34■■□□□ 1.01
TWNKQ96RR1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TWNKQ96RR1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TWNKQ96RR1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
TWNKQ96RR1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.34■■□□□ 1.01
TWNKQ96RR1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TWNKQ96RR1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TWNKQ96RR1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TWNKQ96RR1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TWNKQ96RR1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.34■■□□□ 1.01
TWNKQ96RR1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TWNKQ96RR1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TWNKQ96RR1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.33■■□□□ 1.01
TWNKQ96RR1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
TWNKQ96RR1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.33■■□□□ 1.01
TWNKQ96RR1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TWNKQ96RR1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TWNKQ96RR1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.33■■□□□ 1.01
TWNKQ96RR1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.33■■□□□ 1.01
TWNKQ96RR1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
TWNKQ96RR1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TWNKQ96RR1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TWNKQ96RR1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
TWNKQ96RR1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TWNKQ96RR1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TWNKQ96RR1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.33■■□□□ 1
TWNKQ96RR1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.33■■□□□ 1
TWNKQ96RR1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
TWNKQ96RR1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.33■■□□□ 1
TWNKQ96RR1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.33■■□□□ 1
TWNKQ96RR1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.32■■□□□ 1
TWNKQ96RR1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TWNKQ96RR1 KRT8P20-201ENST00000423953 1409 ntBASIC21.32■■□□□ 1
TWNKQ96RR1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TWNKQ96RR1 AC112907.3-201ENST00000577781 2400 ntBASIC21.32■■□□□ 1
TWNKQ96RR1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TWNKQ96RR1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.32■■□□□ 1
TWNKQ96RR1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.32■■□□□ 1
TWNKQ96RR1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.32■■□□□ 1
TWNKQ96RR1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.32■■□□□ 1
TWNKQ96RR1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.32■■□□□ 1
TWNKQ96RR1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.32■■□□□ 1
TWNKQ96RR1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.32■■□□□ 1
TWNKQ96RR1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TWNKQ96RR1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TWNKQ96RR1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.31■■□□□ 1
TWNKQ96RR1 BX119927.1-201ENST00000636596 1552 ntBASIC21.31■■□□□ 1
TWNKQ96RR1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TWNKQ96RR1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TWNKQ96RR1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.31■■□□□ 1
TWNKQ96RR1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TWNKQ96RR1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
TWNKQ96RR1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TWNKQ96RR1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TWNKQ96RR1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.31■■□□□ 1
TWNKQ96RR1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TWNKQ96RR1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.31■■□□□ 1
TWNKQ96RR1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.31■■□□□ 1
TWNKQ96RR1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
TWNKQ96RR1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TWNKQ96RR1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TWNKQ96RR1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.31■■□□□ 1
TWNKQ96RR1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.31■■□□□ 1
TWNKQ96RR1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TWNKQ96RR1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.3■■□□□ 1
TWNKQ96RR1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TWNKQ96RR1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.3■■□□□ 1
TWNKQ96RR1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TWNKQ96RR1 TSPY20P-201ENST00000450910 630 ntBASIC21.3■■□□□ 1
TWNKQ96RR1 UNC93B4-201ENST00000505679 747 ntBASIC21.3■■□□□ 1
TWNKQ96RR1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.3■■□□□ 1
TWNKQ96RR1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.3■■□□□ 1
TWNKQ96RR1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.3■■□□□ 1
TWNKQ96RR1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.3■■□□□ 1
TWNKQ96RR1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TWNKQ96RR1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.3■■□□□ 1
TWNKQ96RR1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.3■■□□□ 1
TWNKQ96RR1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms