Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
BBS4Q96RK4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.63
BBS4Q96RK4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
BBS4Q96RK4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
BBS4Q96RK4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
BBS4Q96RK4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
BBS4Q96RK4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
BBS4Q96RK4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
BBS4Q96RK4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.01■□□□□ 0.63
BBS4Q96RK4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.01■□□□□ 0.63
BBS4Q96RK4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.01■□□□□ 0.63
BBS4Q96RK4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 AL355472.2-201ENST00000422958 438 ntBASIC19.01■□□□□ 0.63
BBS4Q96RK4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.01■□□□□ 0.63
BBS4Q96RK4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.01■□□□□ 0.63
BBS4Q96RK4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.01■□□□□ 0.63
BBS4Q96RK4 CYP2T3P-201ENST00000601990 817 ntBASIC19.01■□□□□ 0.63
BBS4Q96RK4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
BBS4Q96RK4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.01■□□□□ 0.63
BBS4Q96RK4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 AC112907.3-201ENST00000577781 2400 ntBASIC19.01■□□□□ 0.63
BBS4Q96RK4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.01■□□□□ 0.63
BBS4Q96RK4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BBS4Q96RK4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BBS4Q96RK4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
BBS4Q96RK4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19■□□□□ 0.63
BBS4Q96RK4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BBS4Q96RK4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19■□□□□ 0.63
BBS4Q96RK4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19■□□□□ 0.63
BBS4Q96RK4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BBS4Q96RK4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19■□□□□ 0.63
BBS4Q96RK4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
BBS4Q96RK4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19■□□□□ 0.63
BBS4Q96RK4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19■□□□□ 0.63
BBS4Q96RK4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19■□□□□ 0.63
BBS4Q96RK4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BBS4Q96RK4 AC105020.6-201ENST00000621523 1217 ntBASIC19■□□□□ 0.63
BBS4Q96RK4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19■□□□□ 0.63
BBS4Q96RK4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19■□□□□ 0.63
BBS4Q96RK4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19■□□□□ 0.63
BBS4Q96RK4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19■□□□□ 0.63
BBS4Q96RK4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
BBS4Q96RK4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
BBS4Q96RK4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BBS4Q96RK4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19■□□□□ 0.63
BBS4Q96RK4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
BBS4Q96RK4 AC010980.2-201ENST00000587099 1412 ntBASIC19■□□□□ 0.63
BBS4Q96RK4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BBS4Q96RK4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
BBS4Q96RK4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.99■□□□□ 0.63
BBS4Q96RK4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 CDCA4P2-201ENST00000441182 718 ntBASIC18.99■□□□□ 0.63
BBS4Q96RK4 AC026185.1-201ENST00000445748 174 ntBASIC18.99■□□□□ 0.63
BBS4Q96RK4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.99■□□□□ 0.63
BBS4Q96RK4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.99■□□□□ 0.63
BBS4Q96RK4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.99■□□□□ 0.63
BBS4Q96RK4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.99■□□□□ 0.63
BBS4Q96RK4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.99■□□□□ 0.63
BBS4Q96RK4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.99■□□□□ 0.63
BBS4Q96RK4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.99■□□□□ 0.63
BBS4Q96RK4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.99■□□□□ 0.63
BBS4Q96RK4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BBS4Q96RK4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
BBS4Q96RK4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BBS4Q96RK4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.98■□□□□ 0.63
BBS4Q96RK4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BBS4Q96RK4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.98■□□□□ 0.63
BBS4Q96RK4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BBS4Q96RK4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BBS4Q96RK4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BBS4Q96RK4 AL512625.2-201ENST00000417533 625 ntBASIC18.98■□□□□ 0.63
BBS4Q96RK4 AC093787.1-201ENST00000450396 207 ntBASIC18.98■□□□□ 0.63
BBS4Q96RK4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.98■□□□□ 0.63
BBS4Q96RK4 AL589743.5-201ENST00000616611 1050 ntBASIC18.98■□□□□ 0.63
BBS4Q96RK4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BBS4Q96RK4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms