Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.22■□□□□ 0.51
SNX18Q96RF0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX18Q96RF0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX18Q96RF0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX18Q96RF0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX18Q96RF0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
SNX18Q96RF0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX18Q96RF0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX18Q96RF0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNX18Q96RF0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX18Q96RF0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX18Q96RF0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX18Q96RF0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX18Q96RF0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNX18Q96RF0 TNXA-203ENST00000507684 2038 ntBASIC18.22■□□□□ 0.51
SNX18Q96RF0 AC005082.1-201ENST00000413042 2259 ntBASIC18.21■□□□□ 0.51
SNX18Q96RF0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SNX18Q96RF0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX18Q96RF0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX18Q96RF0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX18Q96RF0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX18Q96RF0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX18Q96RF0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.21■□□□□ 0.51
SNX18Q96RF0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX18Q96RF0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNX18Q96RF0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.21■□□□□ 0.51
SNX18Q96RF0 AC007322.3-201ENST00000426526 701 ntBASIC18.21■□□□□ 0.51
SNX18Q96RF0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.21■□□□□ 0.51
SNX18Q96RF0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.21■□□□□ 0.51
SNX18Q96RF0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.21■□□□□ 0.51
SNX18Q96RF0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.21■□□□□ 0.51
SNX18Q96RF0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX18Q96RF0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNX18Q96RF0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX18Q96RF0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
SNX18Q96RF0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.21■□□□□ 0.5
SNX18Q96RF0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 AL512408.1-201ENST00000569378 2000 ntBASIC18.2■□□□□ 0.5
SNX18Q96RF0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SNX18Q96RF0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX18Q96RF0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX18Q96RF0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX18Q96RF0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX18Q96RF0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX18Q96RF0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNX18Q96RF0 AC016769.1-201ENST00000409132 1010 ntBASIC18.19■□□□□ 0.5
SNX18Q96RF0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX18Q96RF0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX18Q96RF0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 AC137761.2-201ENST00000561729 223 ntBASIC18.19■□□□□ 0.5
SNX18Q96RF0 AC145350.3-201ENST00000569033 163 ntBASIC18.19■□□□□ 0.5
SNX18Q96RF0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNX18Q96RF0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX18Q96RF0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX18Q96RF0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SNX18Q96RF0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms