Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CASD1Q96PB1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CASD1Q96PB1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CASD1Q96PB1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CASD1Q96PB1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CASD1Q96PB1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CASD1Q96PB1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CASD1Q96PB1 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.54■■□□□ 1.04
CASD1Q96PB1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CASD1Q96PB1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CASD1Q96PB1 MMP23A-201ENST00000234610 1017 ntBASIC21.54■■□□□ 1.04
CASD1Q96PB1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CASD1Q96PB1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CASD1Q96PB1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CASD1Q96PB1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CASD1Q96PB1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.54■■□□□ 1.04
CASD1Q96PB1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.54■■□□□ 1.04
CASD1Q96PB1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CASD1Q96PB1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CASD1Q96PB1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.54■■□□□ 1.04
CASD1Q96PB1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CASD1Q96PB1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.54■■□□□ 1.04
CASD1Q96PB1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.54■■□□□ 1.04
CASD1Q96PB1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.54■■□□□ 1.04
CASD1Q96PB1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CASD1Q96PB1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.53■■□□□ 1.04
CASD1Q96PB1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CASD1Q96PB1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.53■■□□□ 1.04
CASD1Q96PB1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CASD1Q96PB1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.53■■□□□ 1.04
CASD1Q96PB1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CASD1Q96PB1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.53■■□□□ 1.04
CASD1Q96PB1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CASD1Q96PB1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.53■■□□□ 1.04
CASD1Q96PB1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CASD1Q96PB1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CASD1Q96PB1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CASD1Q96PB1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CASD1Q96PB1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CASD1Q96PB1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CASD1Q96PB1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.52■■□□□ 1.04
CASD1Q96PB1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.52■■□□□ 1.04
CASD1Q96PB1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.52■■□□□ 1.04
CASD1Q96PB1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CASD1Q96PB1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CASD1Q96PB1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.52■■□□□ 1.03
CASD1Q96PB1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CASD1Q96PB1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
CASD1Q96PB1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CASD1Q96PB1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CASD1Q96PB1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CASD1Q96PB1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CASD1Q96PB1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CASD1Q96PB1 AP002982.1-201ENST00000492365 877 ntBASIC21.51■■□□□ 1.03
CASD1Q96PB1 NUDT16P1-203ENST00000513809 620 ntBASIC21.51■■□□□ 1.03
CASD1Q96PB1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.51■■□□□ 1.03
CASD1Q96PB1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CASD1Q96PB1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.51■■□□□ 1.03
CASD1Q96PB1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CASD1Q96PB1 KRT8P17-201ENST00000453110 1448 ntBASIC21.51■■□□□ 1.03
CASD1Q96PB1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CASD1Q96PB1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CASD1Q96PB1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CASD1Q96PB1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.5■■□□□ 1.03
CASD1Q96PB1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CASD1Q96PB1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CASD1Q96PB1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.5■■□□□ 1.03
CASD1Q96PB1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CASD1Q96PB1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CASD1Q96PB1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CASD1Q96PB1 RBM17P1-201ENST00000453646 1190 ntBASIC21.5■■□□□ 1.03
CASD1Q96PB1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.5■■□□□ 1.03
CASD1Q96PB1 REXO1L10P-201ENST00000615707 1290 ntBASIC21.5■■□□□ 1.03
CASD1Q96PB1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.5■■□□□ 1.03
CASD1Q96PB1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CASD1Q96PB1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CASD1Q96PB1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.5■■□□□ 1.03
CASD1Q96PB1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CASD1Q96PB1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CASD1Q96PB1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASD1Q96PB1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASD1Q96PB1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASD1Q96PB1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CASD1Q96PB1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASD1Q96PB1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASD1Q96PB1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASD1Q96PB1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASD1Q96PB1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASD1Q96PB1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASD1Q96PB1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.49■■□□□ 1.03
CASD1Q96PB1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.49■■□□□ 1.03
CASD1Q96PB1 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.49■■□□□ 1.03
CASD1Q96PB1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.49■■□□□ 1.03
CASD1Q96PB1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.49■■□□□ 1.03
CASD1Q96PB1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.49■■□□□ 1.03
CASD1Q96PB1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.49■■□□□ 1.03
CASD1Q96PB1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASD1Q96PB1 AC079598.2-202ENST00000546624 1451 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms