Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1AQ96P16 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RPRD1AQ96P16 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1AQ96P16 HLA-G-202ENST00000376815 851 ntBASIC20.69■□□□□ 0.9
RPRD1AQ96P16 HLA-G-203ENST00000376818 1127 ntBASIC20.69■□□□□ 0.9
RPRD1AQ96P16 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.69■□□□□ 0.9
RPRD1AQ96P16 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RPRD1AQ96P16 AC008403.3-201ENST00000598924 454 ntBASIC20.69■□□□□ 0.9
RPRD1AQ96P16 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1AQ96P16 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
RPRD1AQ96P16 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1AQ96P16 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 AL031963.3-201ENST00000606441 850 ntBASIC20.68■□□□□ 0.9
RPRD1AQ96P16 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 AP005212.1-201ENST00000581547 1997 ntBASIC20.68■□□□□ 0.9
RPRD1AQ96P16 KRT8P20-201ENST00000423953 1409 ntBASIC20.68■□□□□ 0.9
RPRD1AQ96P16 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.68■□□□□ 0.9
RPRD1AQ96P16 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 AC008687.6-201ENST00000596318 630 ntBASIC20.67■□□□□ 0.9
RPRD1AQ96P16 AC006058.3-201ENST00000606217 1069 ntBASIC20.67■□□□□ 0.9
RPRD1AQ96P16 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPRD1AQ96P16 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 KRT8P17-201ENST00000453110 1448 ntBASIC20.66■□□□□ 0.9
RPRD1AQ96P16 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPRD1AQ96P16 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 KRT18P29-201ENST00000397031 1267 ntBASIC20.65■□□□□ 0.9
RPRD1AQ96P16 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.65■□□□□ 0.9
RPRD1AQ96P16 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms