Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 AC133552.2-202ENST00000575694 574 ntBASIC19.79■□□□□ 0.76
CCDC138Q96M89 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC138Q96M89 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC138Q96M89 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC138Q96M89 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC138Q96M89 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC138Q96M89 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC138Q96M89 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC138Q96M89 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC138Q96M89 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC138Q96M89 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC138Q96M89 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC138Q96M89 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC138Q96M89 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC138Q96M89 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC138Q96M89 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC138Q96M89 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC138Q96M89 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC138Q96M89 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC138Q96M89 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC138Q96M89 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC138Q96M89 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC138Q96M89 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC138Q96M89 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC138Q96M89 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC138Q96M89 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC138Q96M89 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC138Q96M89 KRT18P68-201ENST00000392293 1000 ntBASIC19.77■□□□□ 0.76
CCDC138Q96M89 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC138Q96M89 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC138Q96M89 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC138Q96M89 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC138Q96M89 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC138Q96M89 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC138Q96M89 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC138Q96M89 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.77■□□□□ 0.75
CCDC138Q96M89 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CCDC138Q96M89 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CCDC138Q96M89 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC138Q96M89 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC138Q96M89 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC138Q96M89 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.77■□□□□ 0.75
CCDC138Q96M89 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC138Q96M89 AC010980.2-201ENST00000587099 1412 ntBASIC19.76■□□□□ 0.75
CCDC138Q96M89 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC138Q96M89 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC138Q96M89 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC138Q96M89 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC138Q96M89 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC138Q96M89 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC138Q96M89 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC138Q96M89 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC138Q96M89 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC138Q96M89 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC138Q96M89 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC138Q96M89 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC138Q96M89 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC138Q96M89 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC138Q96M89 AC090192.1-201ENST00000517740 490 ntBASIC19.76■□□□□ 0.75
CCDC138Q96M89 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC138Q96M89 CYP2T3P-201ENST00000601990 817 ntBASIC19.76■□□□□ 0.75
CCDC138Q96M89 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC138Q96M89 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC138Q96M89 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC138Q96M89 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC138Q96M89 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC138Q96M89 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC138Q96M89 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC138Q96M89 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC138Q96M89 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC138Q96M89 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC138Q96M89 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC138Q96M89 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC138Q96M89 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC138Q96M89 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC138Q96M89 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC138Q96M89 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC138Q96M89 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC138Q96M89 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC138Q96M89 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms