Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.63■□□□□ 0.41
USP9XQ93008 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.63■□□□□ 0.41
USP9XQ93008 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP9XQ93008 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.63■□□□□ 0.41
USP9XQ93008 AC093458.2-201ENST00000623150 629 ntBASIC17.63■□□□□ 0.41
USP9XQ93008 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.63■□□□□ 0.41
USP9XQ93008 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP9XQ93008 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP9XQ93008 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.62■□□□□ 0.41
USP9XQ93008 AC005332.1-201ENST00000577698 1310 ntBASIC17.62■□□□□ 0.41
USP9XQ93008 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
USP9XQ93008 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 AC023632.3-201ENST00000521633 145 ntBASIC17.62■□□□□ 0.41
USP9XQ93008 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.62■□□□□ 0.41
USP9XQ93008 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
USP9XQ93008 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
USP9XQ93008 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
USP9XQ93008 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.62■□□□□ 0.41
USP9XQ93008 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.62■□□□□ 0.41
USP9XQ93008 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
USP9XQ93008 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP9XQ93008 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
USP9XQ93008 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
USP9XQ93008 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP9XQ93008 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.61■□□□□ 0.41
USP9XQ93008 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.61■□□□□ 0.41
USP9XQ93008 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.61■□□□□ 0.41
USP9XQ93008 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP9XQ93008 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
USP9XQ93008 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP9XQ93008 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP9XQ93008 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP9XQ93008 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP9XQ93008 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
USP9XQ93008 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.61■□□□□ 0.41
USP9XQ93008 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.61■□□□□ 0.41
USP9XQ93008 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP9XQ93008 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP9XQ93008 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP9XQ93008 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.61■□□□□ 0.41
USP9XQ93008 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.61■□□□□ 0.41
USP9XQ93008 RN7SL510P-201ENST00000581311 263 ntBASIC17.61■□□□□ 0.41
USP9XQ93008 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.61■□□□□ 0.41
USP9XQ93008 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.61■□□□□ 0.41
USP9XQ93008 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP9XQ93008 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP9XQ93008 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP9XQ93008 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP9XQ93008 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.6■□□□□ 0.41
USP9XQ93008 AC069148.1-201ENST00000608741 768 ntBASIC17.6■□□□□ 0.41
USP9XQ93008 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
USP9XQ93008 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP9XQ93008 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP9XQ93008 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
USP9XQ93008 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP9XQ93008 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP9XQ93008 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.6■□□□□ 0.41
USP9XQ93008 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
USP9XQ93008 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.6■□□□□ 0.41
USP9XQ93008 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.6■□□□□ 0.41
USP9XQ93008 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP9XQ93008 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP9XQ93008 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.59■□□□□ 0.41
USP9XQ93008 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.59■□□□□ 0.41
USP9XQ93008 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.59■□□□□ 0.41
USP9XQ93008 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP9XQ93008 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP9XQ93008 FSCN1P1-201ENST00000568912 1481 ntBASIC17.59■□□□□ 0.41
USP9XQ93008 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.59■□□□□ 0.41
USP9XQ93008 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP9XQ93008 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP9XQ93008 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
USP9XQ93008 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP9XQ93008 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP9XQ93008 AC097488.1-201ENST00000507834 756 ntBASIC17.59■□□□□ 0.41
USP9XQ93008 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.59■□□□□ 0.41
USP9XQ93008 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.59■□□□□ 0.41
USP9XQ93008 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.59■□□□□ 0.41
USP9XQ93008 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.59■□□□□ 0.41
USP9XQ93008 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP9XQ93008 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.59■□□□□ 0.41
USP9XQ93008 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP9XQ93008 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP9XQ93008 KRT8P45-201ENST00000414328 1447 ntBASIC17.58■□□□□ 0.41
USP9XQ93008 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.58■□□□□ 0.41
USP9XQ93008 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP9XQ93008 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms