Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
AP3S1Q92572 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
AP3S1Q92572 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
AP3S1Q92572 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
AP3S1Q92572 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
AP3S1Q92572 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3S1Q92572 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3S1Q92572 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
AP3S1Q92572 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3S1Q92572 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3S1Q92572 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.67■□□□□ 0.42
AP3S1Q92572 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3S1Q92572 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3S1Q92572 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3S1Q92572 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3S1Q92572 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.66■□□□□ 0.42
AP3S1Q92572 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 MIR6724-1-201ENST00000616420 92 ntBASIC17.66■□□□□ 0.42
AP3S1Q92572 MIR6724-2-201ENST00000616483 92 ntBASIC17.66■□□□□ 0.42
AP3S1Q92572 MIR6724-4-201ENST00000617390 92 ntBASIC17.66■□□□□ 0.42
AP3S1Q92572 MIR6724-3-201ENST00000622482 92 ntBASIC17.66■□□□□ 0.42
AP3S1Q92572 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3S1Q92572 AC079598.2-202ENST00000546624 1451 ntBASIC17.66■□□□□ 0.42
AP3S1Q92572 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.66■□□□□ 0.42
AP3S1Q92572 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3S1Q92572 LINC01465-201ENST00000408887 1940 ntBASIC17.66■□□□□ 0.42
AP3S1Q92572 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.66■□□□□ 0.42
AP3S1Q92572 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S1Q92572 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.65■□□□□ 0.42
AP3S1Q92572 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
AP3S1Q92572 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
AP3S1Q92572 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.65■□□□□ 0.42
AP3S1Q92572 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S1Q92572 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S1Q92572 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.65■□□□□ 0.42
AP3S1Q92572 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S1Q92572 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
AP3S1Q92572 TSPY9P-201ENST00000440215 945 ntBASIC17.65■□□□□ 0.42
AP3S1Q92572 TSPY11P-201ENST00000442607 1045 ntBASIC17.65■□□□□ 0.42
AP3S1Q92572 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
AP3S1Q92572 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S1Q92572 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
AP3S1Q92572 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.65■□□□□ 0.42
AP3S1Q92572 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3S1Q92572 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.64■□□□□ 0.42
AP3S1Q92572 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
AP3S1Q92572 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP3S1Q92572 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
AP3S1Q92572 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3S1Q92572 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3S1Q92572 SMUG1P1-201ENST00000590640 811 ntBASIC17.64■□□□□ 0.41
AP3S1Q92572 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
AP3S1Q92572 MIR2861-201ENST00000636310 90 ntBASIC17.64■□□□□ 0.41
AP3S1Q92572 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms