Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.91■□□□□ 0.62
TM9SF4Q92544 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 SOX15-203ENST00000570788 1093 ntBASIC18.91■□□□□ 0.62
TM9SF4Q92544 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TM9SF4Q92544 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.91■□□□□ 0.62
TM9SF4Q92544 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TM9SF4Q92544 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TM9SF4Q92544 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.91■□□□□ 0.62
TM9SF4Q92544 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF4Q92544 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF4Q92544 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF4Q92544 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF4Q92544 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF4Q92544 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF4Q92544 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 RPPH1-201ENST00000516869 333 ntBASIC18.9■□□□□ 0.62
TM9SF4Q92544 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF4Q92544 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF4Q92544 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF4Q92544 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF4Q92544 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.9■□□□□ 0.62
TM9SF4Q92544 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM9SF4Q92544 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TM9SF4Q92544 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TM9SF4Q92544 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TM9SF4Q92544 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.89■□□□□ 0.62
TM9SF4Q92544 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TM9SF4Q92544 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TM9SF4Q92544 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.89■□□□□ 0.61
TM9SF4Q92544 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TM9SF4Q92544 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TM9SF4Q92544 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TM9SF4Q92544 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.89■□□□□ 0.61
TM9SF4Q92544 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM9SF4Q92544 AC007952.6-201ENST00000573168 2673 ntBASIC18.88■□□□□ 0.61
TM9SF4Q92544 AC003957.1-201ENST00000625108 2673 ntBASIC18.88■□□□□ 0.61
TM9SF4Q92544 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
TM9SF4Q92544 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TM9SF4Q92544 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.88■□□□□ 0.61
TM9SF4Q92544 RN7SL471P-201ENST00000580476 299 ntBASIC18.88■□□□□ 0.61
TM9SF4Q92544 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TM9SF4Q92544 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.88■□□□□ 0.61
TM9SF4Q92544 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.88■□□□□ 0.61
TM9SF4Q92544 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.88■□□□□ 0.61
TM9SF4Q92544 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.88■□□□□ 0.61
TM9SF4Q92544 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.88■□□□□ 0.61
TM9SF4Q92544 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF4Q92544 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TM9SF4Q92544 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF4Q92544 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF4Q92544 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms