Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 FAM201B-201ENST00000458407 597 ntBASIC20.48■□□□□ 0.87
SCG3Q8WXD2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 AFG3L1P-217ENST00000557444 2447 ntBASIC20.47■□□□□ 0.87
SCG3Q8WXD2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 BX276092.2-201ENST00000417668 665 ntBASIC20.47■□□□□ 0.87
SCG3Q8WXD2 AC091799.1-201ENST00000422823 811 ntBASIC20.47■□□□□ 0.87
SCG3Q8WXD2 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.47■□□□□ 0.87
SCG3Q8WXD2 TSPY20P-201ENST00000450910 630 ntBASIC20.47■□□□□ 0.87
SCG3Q8WXD2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 AC092118.2-201ENST00000613495 667 ntBASIC20.47■□□□□ 0.87
SCG3Q8WXD2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 AC073314.1-201ENST00000568729 2216 ntBASIC20.47■□□□□ 0.87
SCG3Q8WXD2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCG3Q8WXD2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 AC093787.1-201ENST00000450396 207 ntBASIC20.46■□□□□ 0.87
SCG3Q8WXD2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCG3Q8WXD2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SCG3Q8WXD2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 RARRES2P4-201ENST00000514074 484 ntBASIC20.45■□□□□ 0.86
SCG3Q8WXD2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SCG3Q8WXD2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms