Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 DUX4L19-201ENST00000557448 1267 ntBASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 MIR3621-201ENST00000580529 85 ntBASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 RARRES2P11-201ENST00000635158 484 ntBASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 AL049812.1-201ENST00000432563 2267 ntBASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 KRT16P3-201ENST00000439127 1283 ntBASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.14■□□□□ 0.33
SMIM4Q8WVI0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM4Q8WVI0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMIM4Q8WVI0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms