Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 LINC01238-205ENST00000567549 1107 ntBASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 AP000347.1-202ENST00000435868 847 ntBASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 C2orf69P3-201ENST00000565542 1120 ntBASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 AC127496.7-201ENST00000625110 1798 ntBASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 KSR1P1-201ENST00000446298 240 ntBASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 FAM86EP-206ENST00000510506 987 ntBASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 C1QL1P1-201ENST00000568105 661 ntBASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ALMS1Q8TCU4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 AL390719.1-204ENST00000412397 1219 ntBASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 MFAP1P1-201ENST00000442257 1255 ntBASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 KRT18P38-201ENST00000449496 1282 ntBASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ALMS1Q8TCU4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 RNF152P1-201ENST00000397754 604 ntBASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 AC004980.1-204ENST00000429707 299 ntBASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 COX11P1-201ENST00000489116 835 ntBASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.62□□□□□ -0.23
ALMS1Q8TCU4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 AL671277.2-201ENST00000458060 996 ntBASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 AC092647.4-201ENST00000457211 535 ntBASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 IER3-202ENST00000376377 1350 ntBASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ALMS1Q8TCU4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms