Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGCLL1Q8TB92 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.72■□□□□ 0.75
HMGCLL1Q8TB92 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HMGCLL1Q8TB92 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLL1Q8TB92 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLL1Q8TB92 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCLL1Q8TB92 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HMGCLL1Q8TB92 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCLL1Q8TB92 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 KRT17P1-201ENST00000399211 1546 ntBASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 MIR4758-201ENST00000577688 71 ntBASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCLL1Q8TB92 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGCLL1Q8TB92 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 AC092720.2-201ENST00000602388 1665 ntBASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 LSM12P1-201ENST00000411836 588 ntBASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 AC087289.5-201ENST00000586076 3175 ntBASIC19.69■□□□□ 0.74
HMGCLL1Q8TB92 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 AL138781.1-201ENST00000566567 1274 ntBASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCLL1Q8TB92 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms