Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 C2orf69P4-201ENST00000565394 541 ntBASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH19Q8TAB3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 TSPY6P-201ENST00000448518 926 ntBASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDH19Q8TAB3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 GUSBP6-202ENST00000438529 1198 ntBASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH19Q8TAB3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 KRT8P17-201ENST00000453110 1448 ntBASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 LSM12P1-201ENST00000411836 588 ntBASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 BX276092.2-201ENST00000417668 665 ntBASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 AC142086.2-201ENST00000569753 217 ntBASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH19Q8TAB3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.7■□□□□ 0.91
PCDH19Q8TAB3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH19Q8TAB3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 SLC29A4P1-201ENST00000398760 971 ntBASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms