Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 PTBP1P-201ENST00000554374 1601 ntBASIC15.68■□□□□ 0.1
LINC01006Q8NI28 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01006Q8NI28 KRT8P20-201ENST00000423953 1409 ntBASIC15.68■□□□□ 0.1
LINC01006Q8NI28 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 UNC93B2-201ENST00000285383 730 ntBASIC15.67■□□□□ 0.1
LINC01006Q8NI28 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 TMPOP1-202ENST00000424642 1267 ntBASIC15.67■□□□□ 0.1
LINC01006Q8NI28 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 RBM17P1-201ENST00000453646 1190 ntBASIC15.67■□□□□ 0.1
LINC01006Q8NI28 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 AL031963.3-201ENST00000606441 850 ntBASIC15.67■□□□□ 0.1
LINC01006Q8NI28 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC01006Q8NI28 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 REXO1L10P-201ENST00000615707 1290 ntBASIC15.66■□□□□ 0.1
LINC01006Q8NI28 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01006Q8NI28 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 AC145285.6-201ENST00000604632 637 ntBASIC15.65■□□□□ 0.1
LINC01006Q8NI28 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 AC079598.2-202ENST00000546624 1451 ntBASIC15.65■□□□□ 0.1
LINC01006Q8NI28 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01006Q8NI28 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01006Q8NI28 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms