Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RTL9Q8NET4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RTL9Q8NET4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RTL9Q8NET4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RTL9Q8NET4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RTL9Q8NET4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RTL9Q8NET4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
RTL9Q8NET4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTL9Q8NET4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RTL9Q8NET4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RTL9Q8NET4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RTL9Q8NET4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC24.82■■□□□ 1.56
RTL9Q8NET4 KRT17P2-201ENST00000300992 1314 ntBASIC24.82■■□□□ 1.56
RTL9Q8NET4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.82■■□□□ 1.56
RTL9Q8NET4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
RTL9Q8NET4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTL9Q8NET4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC24.82■■□□□ 1.56
RTL9Q8NET4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
RTL9Q8NET4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTL9Q8NET4 AC087499.1-201ENST00000418141 1075 ntBASIC24.82■■□□□ 1.56
RTL9Q8NET4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.82■■□□□ 1.56
RTL9Q8NET4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RTL9Q8NET4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC24.82■■□□□ 1.56
RTL9Q8NET4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTL9Q8NET4 MIR4785-201ENST00000585005 73 ntBASIC24.82■■□□□ 1.56
RTL9Q8NET4 AF106564.1-201ENST00000607058 2553 ntBASIC24.82■■□□□ 1.56
RTL9Q8NET4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.82■■□□□ 1.56
RTL9Q8NET4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.82■■□□□ 1.56
RTL9Q8NET4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.82■■□□□ 1.56
RTL9Q8NET4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.82■■□□□ 1.56
RTL9Q8NET4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTL9Q8NET4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
RTL9Q8NET4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RTL9Q8NET4 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.81■■□□□ 1.56
RTL9Q8NET4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC24.81■■□□□ 1.56
RTL9Q8NET4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC24.81■■□□□ 1.56
RTL9Q8NET4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTL9Q8NET4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RTL9Q8NET4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
RTL9Q8NET4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTL9Q8NET4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.81■■□□□ 1.56
RTL9Q8NET4 AC006128.1-201ENST00000624704 1661 ntBASIC24.81■■□□□ 1.56
RTL9Q8NET4 LINC00565-201ENST00000562710 2331 ntBASIC24.81■■□□□ 1.56
RTL9Q8NET4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
RTL9Q8NET4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RTL9Q8NET4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTL9Q8NET4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.81■■□□□ 1.56
RTL9Q8NET4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RTL9Q8NET4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 AL355075.4-201ENST00000554988 638 ntBASIC24.8■■□□□ 1.56
RTL9Q8NET4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 AC012306.2-201ENST00000609350 630 ntBASIC24.8■■□□□ 1.56
RTL9Q8NET4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTL9Q8NET4 PENK-204ENST00000518770 863 ntTSL 2 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 AF186192.3-201ENST00000583427 947 ntBASIC24.8■■□□□ 1.56
RTL9Q8NET4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
RTL9Q8NET4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RTL9Q8NET4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RTL9Q8NET4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
RTL9Q8NET4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms