Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 B3GAT3P1-201ENST00000471720 806 ntBASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 AC069148.1-201ENST00000608741 768 ntBASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 PVRIG2P-201ENST00000435460 978 ntBASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 AC091390.4-202ENST00000476426 537 ntBASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCDC168Q8NDH2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 AC097488.1-201ENST00000507834 756 ntBASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 FAM86EP-206ENST00000510506 987 ntBASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC168Q8NDH2 AC005332.1-201ENST00000577698 1310 ntBASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 DGCR10-201ENST00000609839 495 ntBASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.85■□□□□ 0.29
CCDC168Q8NDH2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 FSCN1P1-201ENST00000568912 1481 ntBASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 AC128688.1-201ENST00000487626 519 ntBASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC168Q8NDH2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC168Q8NDH2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
CCDC168Q8NDH2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC168Q8NDH2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC168Q8NDH2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC168Q8NDH2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC168Q8NDH2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms