Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC89Q8N998 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC89Q8N998 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC89Q8N998 PGM5P4-201ENST00000421970 445 ntBASIC20.78■□□□□ 0.92
CCDC89Q8N998 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC89Q8N998 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC89Q8N998 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC89Q8N998 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC89Q8N998 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC89Q8N998 TMEM179-206ENST00000616017 1645 ntBASIC20.78■□□□□ 0.92
CCDC89Q8N998 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC89Q8N998 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC89Q8N998 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC89Q8N998 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCDC89Q8N998 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCDC89Q8N998 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC89Q8N998 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC89Q8N998 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC89Q8N998 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC89Q8N998 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC89Q8N998 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC89Q8N998 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC89Q8N998 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC89Q8N998 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC89Q8N998 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC89Q8N998 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC89Q8N998 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC89Q8N998 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC89Q8N998 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC89Q8N998 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC89Q8N998 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC89Q8N998 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC89Q8N998 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC89Q8N998 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC89Q8N998 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC89Q8N998 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CCDC89Q8N998 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC89Q8N998 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC89Q8N998 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC89Q8N998 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC89Q8N998 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC89Q8N998 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC89Q8N998 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC89Q8N998 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC89Q8N998 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC89Q8N998 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC89Q8N998 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC89Q8N998 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC89Q8N998 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC89Q8N998 NTF6G-201ENST00000591094 616 ntBASIC20.76■□□□□ 0.91
CCDC89Q8N998 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC89Q8N998 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC89Q8N998 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC89Q8N998 AL691432.2-201ENST00000607222 2038 ntBASIC20.76■□□□□ 0.91
CCDC89Q8N998 AC116562.4-201ENST00000641316 2276 ntBASIC20.76■□□□□ 0.91
CCDC89Q8N998 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC89Q8N998 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC89Q8N998 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC89Q8N998 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC89Q8N998 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC89Q8N998 BX119927.1-201ENST00000636596 1552 ntBASIC20.76■□□□□ 0.91
CCDC89Q8N998 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC89Q8N998 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC89Q8N998 AL158211.5-201ENST00000623583 2518 ntBASIC20.75■□□□□ 0.91
CCDC89Q8N998 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC89Q8N998 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC89Q8N998 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CCDC89Q8N998 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC89Q8N998 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC89Q8N998 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC89Q8N998 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC89Q8N998 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC89Q8N998 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC89Q8N998 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC89Q8N998 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC89Q8N998 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC89Q8N998 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC89Q8N998 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC89Q8N998 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC89Q8N998 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC89Q8N998 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 TERF1P5-201ENST00000477545 1207 ntBASIC20.74■□□□□ 0.91
CCDC89Q8N998 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 AL591742.1-201ENST00000604433 565 ntBASIC20.74■□□□□ 0.91
CCDC89Q8N998 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC89Q8N998 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC89Q8N998 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC89Q8N998 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC89Q8N998 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms