Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FITM1-202ENST00000559294 800 ntBASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 AP002982.1-201ENST00000492365 877 ntBASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 LINC01568-207ENST00000641790 1380 ntBASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 AL121603.2-201ENST00000557373 2117 ntBASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.05■□□□□ 0.64
COL27A1Q8IZC6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL27A1Q8IZC6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 AL049796.1-201ENST00000565336 1766 ntBASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 YBX1P10-201ENST00000444752 975 ntBASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 AC026271.3-201ENST00000571884 352 ntBASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL27A1Q8IZC6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.02■□□□□ 0.64
COL27A1Q8IZC6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.02■□□□□ 0.63
COL27A1Q8IZC6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL27A1Q8IZC6 KRT8P20-201ENST00000423953 1409 ntBASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms