Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SCXQ7RTU7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 KRT18P29-201ENST00000397031 1267 ntBASIC13.21□□□□□ -0.29
SCXQ7RTU7 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.21□□□□□ -0.29
SCXQ7RTU7 DUSP5P2-201ENST00000426873 1033 ntBASIC13.21□□□□□ -0.29
SCXQ7RTU7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.21□□□□□ -0.29
SCXQ7RTU7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.21□□□□□ -0.29
SCXQ7RTU7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.21□□□□□ -0.29
SCXQ7RTU7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.21□□□□□ -0.29
SCXQ7RTU7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.21□□□□□ -0.29
SCXQ7RTU7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SCXQ7RTU7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC13.21□□□□□ -0.3
SCXQ7RTU7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.21□□□□□ -0.3
SCXQ7RTU7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SCXQ7RTU7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SCXQ7RTU7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.21□□□□□ -0.3
SCXQ7RTU7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SCXQ7RTU7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 AC091874.3-201ENST00000512672 1195 ntBASIC13.2□□□□□ -0.3
SCXQ7RTU7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 MYC-209ENST00000641252 345 ntBASIC13.2□□□□□ -0.3
SCXQ7RTU7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SCXQ7RTU7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SCXQ7RTU7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
SCXQ7RTU7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
SCXQ7RTU7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SCXQ7RTU7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SCXQ7RTU7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SCXQ7RTU7 LSM12P1-201ENST00000411836 588 ntBASIC13.19□□□□□ -0.3
SCXQ7RTU7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.19□□□□□ -0.3
SCXQ7RTU7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.19□□□□□ -0.3
SCXQ7RTU7 ITM2C-210ENST00000620962 501 ntBASIC13.19□□□□□ -0.3
SCXQ7RTU7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.19□□□□□ -0.3
SCXQ7RTU7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCXQ7RTU7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 AC087289.5-201ENST00000586076 3175 ntBASIC13.18□□□□□ -0.3
SCXQ7RTU7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.18□□□□□ -0.3
SCXQ7RTU7 CDV3P1-201ENST00000471403 739 ntBASIC13.18□□□□□ -0.3
SCXQ7RTU7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms