Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP1BQ7LBR1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 KRT18P68-201ENST00000392293 1000 ntBASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 AL355472.2-201ENST00000422958 438 ntBASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 CD99P1-205ENST00000527459 561 ntBASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP1BQ7LBR1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 KRT18P6-201ENST00000555540 1265 ntBASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP1BQ7LBR1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP1BQ7LBR1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 DUSP5P2-201ENST00000426873 1033 ntBASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP1BQ7LBR1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms