Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC091799.1-201ENST00000422823 811 ntBASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 AF201337.1-201ENST00000520239 748 ntBASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC012653.2-201ENST00000621880 420 ntBASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 OR10C1-204ENST00000622521 1039 ntBASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC022919.1-201ENST00000624979 626 ntBASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PPP4R3CPQ6ZMV5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC006128.1-201ENST00000624704 1661 ntBASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 ZNF92P2-201ENST00000600543 1059 ntBASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC121338.2-201ENST00000622535 1744 ntBASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PPP4R3CPQ6ZMV5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 AL627171.1-201ENST00000618845 1308 ntBASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC142086.2-201ENST00000569753 217 ntBASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC005785.2-201ENST00000624655 631 ntBASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.84■■□□□ 1.25
PPP4R3CPQ6ZMV5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 PLK5-205ENST00000642079 1969 ntBASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 AL512625.2-201ENST00000417533 625 ntBASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 HSFY7P-201ENST00000432672 318 ntBASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC034187.1-201ENST00000437047 561 ntTSL 4 BASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 HSFY8P-201ENST00000437934 318 ntBASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 HSFY5P-201ENST00000453726 309 ntBASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 IL12A-AS1-201ENST00000462431 988 ntTSL 5 BASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 AL109741.3-201ENST00000561748 592 ntBASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC105036.2-201ENST00000569468 176 ntBASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC069236.1-201ENST00000604339 616 ntBASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 AC063944.3-201ENST00000609969 533 ntBASIC22.83■■□□□ 1.25
PPP4R3CPQ6ZMV5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms