Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 ECEL1P1-201ENST00000373592 1742 ntBASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNKSR3Q6P9H4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 AC244015.2-201ENST00000616358 1861 ntBASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 AL031985.4-201ENST00000642138 673 ntBASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNKSR3Q6P9H4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 DUX4L26-201ENST00000489078 1255 ntBASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNKSR3Q6P9H4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNKSR3Q6P9H4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNKSR3Q6P9H4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNKSR3Q6P9H4 AC104076.2-201ENST00000448912 469 ntBASIC21.68■■□□□ 1.06
CNKSR3Q6P9H4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.68■■□□□ 1.06
CNKSR3Q6P9H4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CNKSR3Q6P9H4 NTF6B-201ENST00000591913 560 ntBASIC21.68■■□□□ 1.06
CNKSR3Q6P9H4 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.68■■□□□ 1.06
CNKSR3Q6P9H4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNKSR3Q6P9H4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNKSR3Q6P9H4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 FSCN1P1-201ENST00000568912 1481 ntBASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNKSR3Q6P9H4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 AC121338.2-201ENST00000622535 1744 ntBASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms