Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC137761.2-201ENST00000561729 223 ntBASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 AC145350.3-201ENST00000569033 163 ntBASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 KRT16P2-201ENST00000414673 1423 ntBASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.28■□□□□ 0.52
TMEM53Q6P2H8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 AC016769.1-201ENST00000409132 1010 ntBASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 KRT18P61-201ENST00000585825 1298 ntBASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM53Q6P2H8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM53Q6P2H8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TMEM53Q6P2H8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM53Q6P2H8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
TMEM53Q6P2H8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM53Q6P2H8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM53Q6P2H8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM53Q6P2H8 AL133373.2-201ENST00000623187 2828 ntBASIC18.27■□□□□ 0.51
TMEM53Q6P2H8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 KRT18P11-201ENST00000435214 1283 ntBASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 FEM1AP4-201ENST00000443167 1987 ntBASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM53Q6P2H8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 SLC7A5P2-201ENST00000553010 536 ntBASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms