Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC026310.3-201ENST00000625186 2373 ntBASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
H3F3CQ6NXT2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
H3F3CQ6NXT2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
H3F3CQ6NXT2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
H3F3CQ6NXT2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.58■□□□□ 0.57
H3F3CQ6NXT2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
H3F3CQ6NXT2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.58■□□□□ 0.57
H3F3CQ6NXT2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
H3F3CQ6NXT2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
H3F3CQ6NXT2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
H3F3CQ6NXT2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
H3F3CQ6NXT2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 AC008550.1-201ENST00000511500 884 ntBASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3CQ6NXT2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 AF106564.1-201ENST00000607058 2553 ntBASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.57■□□□□ 0.56
H3F3CQ6NXT2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 PTBP1P-201ENST00000554374 1601 ntBASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 AC124016.1-201ENST00000609552 612 ntBASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3CQ6NXT2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 AC006128.1-201ENST00000624704 1661 ntBASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
H3F3CQ6NXT2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H3F3CQ6NXT2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.54■□□□□ 0.56
H3F3CQ6NXT2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H3F3CQ6NXT2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms