Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.64■□□□□ 0.25
FAM53AQ6NSI3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM53AQ6NSI3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM53AQ6NSI3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 AC093787.1-201ENST00000450396 207 ntBASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM53AQ6NSI3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM53AQ6NSI3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM53AQ6NSI3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM53AQ6NSI3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FAM53AQ6NSI3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FAM53AQ6NSI3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM53AQ6NSI3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM53AQ6NSI3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM53AQ6NSI3 AC007322.1-201ENST00000426983 750 ntBASIC16.6■□□□□ 0.25
FAM53AQ6NSI3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.6■□□□□ 0.25
FAM53AQ6NSI3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms