Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 AC060766.5-201ENST00000590539 871 ntBASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 AC007225.1-201ENST00000566331 1836 ntBASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.94
TTC39BQ5VTQ0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
TTC39BQ5VTQ0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TTC39BQ5VTQ0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39BQ5VTQ0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.88■□□□□ 0.93
TTC39BQ5VTQ0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
TTC39BQ5VTQ0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 AC020907.5-201ENST00000624372 1936 ntBASIC20.86■□□□□ 0.93
TTC39BQ5VTQ0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms