Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 AL031963.3-201ENST00000606441 850 ntBASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PTPN20Q4JDL3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 KRT8P17-201ENST00000453110 1448 ntBASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PTPN20Q4JDL3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.14■□□□□ 0.98
PTPN20Q4JDL3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN20Q4JDL3 AL691432.2-201ENST00000607222 2038 ntBASIC21.14■□□□□ 0.98
PTPN20Q4JDL3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN20Q4JDL3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN20Q4JDL3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 SLC25A24-204ENST00000569674 2357 ntBASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 ID1-201ENST00000376105 1233 ntBASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 AC083880.1-201ENST00000608266 535 ntBASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN20Q4JDL3 KRT8P20-201ENST00000423953 1409 ntBASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 AL355802.2-201ENST00000402069 882 ntBASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 AC073210.2-201ENST00000430369 194 ntBASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 AC069152.1-201ENST00000438030 544 ntBASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 AC023632.3-201ENST00000521633 145 ntBASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.12■□□□□ 0.97
PTPN20Q4JDL3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms