Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PDS5AQ29RF7 DPP3P2-201ENST00000416030 1696 ntBASIC24.19■■□□□ 1.46
PDS5AQ29RF7 AC092720.2-201ENST00000602388 1665 ntBASIC24.19■■□□□ 1.46
PDS5AQ29RF7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDS5AQ29RF7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDS5AQ29RF7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
PDS5AQ29RF7 KRT16P5-201ENST00000455284 522 ntBASIC24.19■■□□□ 1.46
PDS5AQ29RF7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PDS5AQ29RF7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PDS5AQ29RF7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.19■■□□□ 1.46
PDS5AQ29RF7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.19■■□□□ 1.46
PDS5AQ29RF7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PDS5AQ29RF7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.19■■□□□ 1.46
PDS5AQ29RF7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.19■■□□□ 1.46
PDS5AQ29RF7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 NBPF21P-201ENST00000425093 1451 ntBASIC24.18■■□□□ 1.46
PDS5AQ29RF7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
PDS5AQ29RF7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 AP001412.1-201ENST00000608405 714 ntBASIC24.17■■□□□ 1.46
PDS5AQ29RF7 AL049637.2-201ENST00000641778 930 ntBASIC24.17■■□□□ 1.46
PDS5AQ29RF7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PDS5AQ29RF7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDS5AQ29RF7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 SNORA78-201ENST00000459373 127 ntBASIC24.15■■□□□ 1.46
PDS5AQ29RF7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC24.15■■□□□ 1.46
PDS5AQ29RF7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PDS5AQ29RF7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PDS5AQ29RF7 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.14■■□□□ 1.46
PDS5AQ29RF7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC24.14■■□□□ 1.46
PDS5AQ29RF7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC24.14■■□□□ 1.46
PDS5AQ29RF7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PDS5AQ29RF7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC24.14■■□□□ 1.45
PDS5AQ29RF7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.14■■□□□ 1.45
PDS5AQ29RF7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PDS5AQ29RF7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.14■■□□□ 1.45
PDS5AQ29RF7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC24.14■■□□□ 1.45
PDS5AQ29RF7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms