Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH17Q12864 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDH17Q12864 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CDH17Q12864 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH17Q12864 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH17Q12864 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH17Q12864 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH17Q12864 PTBP1P-201ENST00000554374 1601 ntBASIC20.29■□□□□ 0.84
CDH17Q12864 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH17Q12864 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH17Q12864 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH17Q12864 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH17Q12864 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.29■□□□□ 0.84
CDH17Q12864 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.29■□□□□ 0.84
CDH17Q12864 AL137784.2-201ENST00000607332 1000 ntBASIC20.29■□□□□ 0.84
CDH17Q12864 AL589743.5-201ENST00000616611 1050 ntBASIC20.29■□□□□ 0.84
CDH17Q12864 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH17Q12864 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CDH17Q12864 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH17Q12864 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH17Q12864 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDH17Q12864 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH17Q12864 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH17Q12864 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH17Q12864 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH17Q12864 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
CDH17Q12864 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH17Q12864 AL691432.2-201ENST00000607222 2038 ntBASIC20.28■□□□□ 0.84
CDH17Q12864 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH17Q12864 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH17Q12864 AC093787.1-201ENST00000450396 207 ntBASIC20.28■□□□□ 0.84
CDH17Q12864 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.28■□□□□ 0.84
CDH17Q12864 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
CDH17Q12864 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH17Q12864 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH17Q12864 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDH17Q12864 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDH17Q12864 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.27■□□□□ 0.84
CDH17Q12864 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDH17Q12864 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH17Q12864 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.27■□□□□ 0.84
CDH17Q12864 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDH17Q12864 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH17Q12864 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.27■□□□□ 0.84
CDH17Q12864 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH17Q12864 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH17Q12864 AC133552.2-202ENST00000575694 574 ntBASIC20.27■□□□□ 0.84
CDH17Q12864 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDH17Q12864 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDH17Q12864 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDH17Q12864 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH17Q12864 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDH17Q12864 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDH17Q12864 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDH17Q12864 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDH17Q12864 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDH17Q12864 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.26■□□□□ 0.83
CDH17Q12864 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 CDCA4P2-201ENST00000441182 718 ntBASIC20.26■□□□□ 0.83
CDH17Q12864 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 KRT8P17-201ENST00000453110 1448 ntBASIC20.26■□□□□ 0.83
CDH17Q12864 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.26■□□□□ 0.83
CDH17Q12864 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH17Q12864 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH17Q12864 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH17Q12864 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH17Q12864 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH17Q12864 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH17Q12864 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH17Q12864 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.25■□□□□ 0.83
CDH17Q12864 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.25■□□□□ 0.83
CDH17Q12864 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.25■□□□□ 0.83
CDH17Q12864 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDH17Q12864 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH17Q12864 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH17Q12864 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.25■□□□□ 0.83
CDH17Q12864 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.25■□□□□ 0.83
CDH17Q12864 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH17Q12864 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDH17Q12864 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH17Q12864 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH17Q12864 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH17Q12864 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH17Q12864 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH17Q12864 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
CDH17Q12864 KRT17P1-201ENST00000399211 1546 ntBASIC20.24■□□□□ 0.83
CDH17Q12864 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDH17Q12864 AC026185.1-201ENST00000445748 174 ntBASIC20.24■□□□□ 0.83
CDH17Q12864 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.24■□□□□ 0.83
CDH17Q12864 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.24■□□□□ 0.83
CDH17Q12864 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms