Protein–RNA interactions for Protein: Q03776

PRP42, U1 small nuclear ribonucleoprotein component PRP42, yeastyeast

Known RBP Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP42Q03776 MDS3YGL197W 4464 nt1.23□□□□□ -2.21
PRP42Q03776 PAM16YJL104W 450 nt1.23□□□□□ -2.21
PRP42Q03776 YMR290W-AYMR290W-A 348 nt1.23□□□□□ -2.21
PRP42Q03776 BIL1YOR304C-A 231 nt1.23□□□□□ -2.21
PRP42Q03776 SPT7YBR081C 3999 nt1.23□□□□□ -2.21
PRP42Q03776 RAD34YDR314C 2079 nt1.22□□□□□ -2.21
PRP42Q03776 PCC1YKR095W-A 267 nt1.22□□□□□ -2.21
PRP42Q03776 YBR012CYBR012C 420 nt1.22□□□□□ -2.21
PRP42Q03776 tF(GAA)BtF(GAA)B 73 nt1.21□□□□□ -2.22
PRP42Q03776 tF(GAA)FtF(GAA)F 73 nt1.21□□□□□ -2.22
PRP42Q03776 tF(GAA)GtF(GAA)G 73 nt1.21□□□□□ -2.22
PRP42Q03776 tF(GAA)H1tF(GAA)H1 73 nt1.21□□□□□ -2.22
PRP42Q03776 tF(GAA)H2tF(GAA)H2 73 nt1.21□□□□□ -2.22
PRP42Q03776 tF(GAA)MtF(GAA)M 73 nt1.21□□□□□ -2.22
PRP42Q03776 tF(GAA)P1tF(GAA)P1 73 nt1.21□□□□□ -2.22
PRP42Q03776 tF(GAA)P2tF(GAA)P2 73 nt1.21□□□□□ -2.22
PRP42Q03776 FIG4YNL325C 2640 nt1.21□□□□□ -2.22
PRP42Q03776 UBP3YER151C 2739 nt1.2□□□□□ -2.22
PRP42Q03776 YNL284C-BYNL284C-B 5268 nt1.19□□□□□ -2.22
PRP42Q03776 HMRA1YCR097W 381 nt1.19□□□□□ -2.22
PRP42Q03776 MMS4YBR098W 2076 nt1.19□□□□□ -2.22
PRP42Q03776 APL3YBL037W 3078 nt1.18□□□□□ -2.22
PRP42Q03776 MAM33YIL070C 801 nt1.18□□□□□ -2.22
PRP42Q03776 YBR221W-AYBR221W-A 105 nt1.18□□□□□ -2.22
PRP42Q03776 SLD3YGL113W 2007 nt1.18□□□□□ -2.22
PRP42Q03776 EAF1YDR359C 2949 nt1.18□□□□□ -2.22
PRP42Q03776 PKH2YOL100W 3246 nt1.17□□□□□ -2.22
PRP42Q03776 SET3YKR029C 2256 nt1.17□□□□□ -2.22
PRP42Q03776 RPL35AYDL191W 363 nt1.17□□□□□ -2.22
PRP42Q03776 YPR016W-AYPR016W-A 261 nt1.17□□□□□ -2.22
PRP42Q03776 BUD3YCL014W 4911 nt1.16□□□□□ -2.22
PRP42Q03776 ALY2YJL084C 3141 nt1.16□□□□□ -2.22
PRP42Q03776 YHL046W-AYHL046W-A 327 nt1.16□□□□□ -2.22
PRP42Q03776 YBL008W-AYBL008W-A 240 nt1.16□□□□□ -2.22
PRP42Q03776 STO1YMR125W 2586 nt1.16□□□□□ -2.22
PRP42Q03776 YDL206WYDL206W 2289 nt1.15□□□□□ -2.22
PRP42Q03776 APL1YJR005W 2103 nt1.15□□□□□ -2.23
PRP42Q03776 snR56snR56 88 nt1.15□□□□□ -2.23
PRP42Q03776 YIR044CYIR044C 186 nt1.15□□□□□ -2.23
PRP42Q03776 STB6YKL072W 2301 nt1.15□□□□□ -2.23
PRP42Q03776 NIP100YPL174C 2607 nt1.14□□□□□ -2.23
PRP42Q03776 CUL3YGR003W 2235 nt1.14□□□□□ -2.23
PRP42Q03776 GPG1YGL121C 381 nt1.14□□□□□ -2.23
PRP42Q03776 YIL142C-AYIL142C-A 333 nt1.14□□□□□ -2.23
PRP42Q03776 YAR029WYAR029W 225 nt1.14□□□□□ -2.23
PRP42Q03776 HTB2YBL002W 396 nt1.14□□□□□ -2.23
PRP42Q03776 YPR197CYPR197C 564 nt1.14□□□□□ -2.23
PRP42Q03776 UTP20YBL004W 7482 nt1.14□□□□□ -2.23
PRP42Q03776 CDC39YCR093W 6327 nt1.13□□□□□ -2.23
PRP42Q03776 YPR117WYPR117W 7470 nt1.13□□□□□ -2.23
PRP42Q03776 PDE2YOR360C 1581 nt1.13□□□□□ -2.23
PRP42Q03776 IFH1YLR223C 3258 nt1.12□□□□□ -2.23
PRP42Q03776 GIM4YEL003W 336 nt1.12□□□□□ -2.23
PRP42Q03776 YHR175W-AYHR175W-A 150 nt1.12□□□□□ -2.23
PRP42Q03776 YJR011CYJR011C 786 nt1.12□□□□□ -2.23
PRP42Q03776 YBR200W-AYBR200W-A 165 nt1.12□□□□□ -2.23
PRP42Q03776 YCK3YER123W 1575 nt1.12□□□□□ -2.23
PRP42Q03776 RPL34BYIL052C 366 nt1.11□□□□□ -2.23
PRP42Q03776 YAF9YNL107W 681 nt1.1□□□□□ -2.23
PRP42Q03776 YLL007CYLL007C 1998 nt1.1□□□□□ -2.23
PRP42Q03776 YHR007C-AYHR007C-A 216 nt1.09□□□□□ -2.23
PRP42Q03776 PTP2YOR208W 2253 nt1.09□□□□□ -2.24
PRP42Q03776 NUP157YER105C 4176 nt1.09□□□□□ -2.24
PRP42Q03776 YDR048CYDR048C 315 nt1.08□□□□□ -2.24
PRP42Q03776 YPL038W-AYPL038W-A 192 nt1.08□□□□□ -2.24
PRP42Q03776 WAR1YML076C 2835 nt1.08□□□□□ -2.24
PRP42Q03776 YDR521WYDR521W 336 nt1.07□□□□□ -2.24
PRP42Q03776 TAR1YLR154W-C 375 nt1.07□□□□□ -2.24
PRP42Q03776 KAP120YPL125W 3099 nt1.07□□□□□ -2.24
PRP42Q03776 tR(ACG)Q2tR(ACG)Q2 74 nt1.06□□□□□ -2.24
PRP42Q03776 PAN2YGL094C 3348 nt1.05□□□□□ -2.24
PRP42Q03776 GEA2YEL022W 4380 nt1.05□□□□□ -2.24
PRP42Q03776 VAM6YDL077C 3150 nt1.05□□□□□ -2.24
PRP42Q03776 YDR102CYDR102C 333 nt1.04□□□□□ -2.24
PRP42Q03776 YBR206WYBR206W 324 nt1.04□□□□□ -2.24
PRP42Q03776 YJR029WYJR029W 5268 nt1.03□□□□□ -2.24
PRP42Q03776 YPR137C-BYPR137C-B 5268 nt1.03□□□□□ -2.24
PRP42Q03776 SMC1YFL008W 3678 nt1.03□□□□□ -2.24
PRP42Q03776 SCC2YDR180W 4482 nt1.03□□□□□ -2.24
PRP42Q03776 YOL014WYOL014W 375 nt1.03□□□□□ -2.24
PRP42Q03776 YDL240C-AYDL240C-A 138 nt1.02□□□□□ -2.25
PRP42Q03776 HMRA2YCR096C 360 nt1.01□□□□□ -2.25
PRP42Q03776 YBR064WYBR064W 429 nt1.01□□□□□ -2.25
PRP42Q03776 YMR160WYMR160W 2451 nt1□□□□□ -2.25
PRP42Q03776 SSS1YDR086C 243 nt1□□□□□ -2.25
PRP42Q03776 YHL042WYHL042W 453 nt0.99□□□□□ -2.25
PRP42Q03776 DOP1YDR141C 5097 nt0.98□□□□□ -2.25
PRP42Q03776 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
PRP42Q03776 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
PRP42Q03776 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
PRP42Q03776 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
PRP42Q03776 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
PRP42Q03776 ECM12YHR021W-A 456 nt0.98□□□□□ -2.25
PRP42Q03776 RPS25BYLR333C 327 nt0.98□□□□□ -2.25
PRP42Q03776 snR36snR36 182 nt0.98□□□□□ -2.25
PRP42Q03776 DBP6YNR038W 1890 nt0.98□□□□□ -2.25
PRP42Q03776 YJL120WYJL120W 324 nt0.97□□□□□ -2.25
PRP42Q03776 YPL225WYPL225W 441 nt0.97□□□□□ -2.25
PRP42Q03776 YIL115W-AYIL115W-A 372 nt0.96□□□□□ -2.26
PRP42Q03776 SPO21YOL091W 1830 nt0.95□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 94 ms