Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SUPT4H1P63272 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT4H1P63272 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.54■□□□□ 0.24
SUPT4H1P63272 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.54■□□□□ 0.24
SUPT4H1P63272 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT4H1P63272 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT4H1P63272 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT4H1P63272 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT4H1P63272 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT4H1P63272 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT4H1P63272 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT4H1P63272 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT4H1P63272 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT4H1P63272 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT4H1P63272 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT4H1P63272 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT4H1P63272 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT4H1P63272 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT4H1P63272 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT4H1P63272 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT4H1P63272 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT4H1P63272 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT4H1P63272 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 AL138781.2-201ENST00000617896 1843 ntBASIC16.53■□□□□ 0.24
SUPT4H1P63272 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SUPT4H1P63272 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SUPT4H1P63272 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT4H1P63272 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT4H1P63272 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT4H1P63272 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT4H1P63272 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
SUPT4H1P63272 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.52■□□□□ 0.24
SUPT4H1P63272 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.52■□□□□ 0.24
SUPT4H1P63272 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT4H1P63272 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT4H1P63272 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT4H1P63272 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT4H1P63272 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT4H1P63272 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.52■□□□□ 0.24
SUPT4H1P63272 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SUPT4H1P63272 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.52■□□□□ 0.23
SUPT4H1P63272 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
SUPT4H1P63272 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT4H1P63272 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT4H1P63272 LINC01465-201ENST00000408887 1940 ntBASIC16.52■□□□□ 0.23
SUPT4H1P63272 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT4H1P63272 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT4H1P63272 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT4H1P63272 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
SUPT4H1P63272 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT4H1P63272 AC005082.1-201ENST00000413042 2259 ntBASIC16.52■□□□□ 0.23
SUPT4H1P63272 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.52■□□□□ 0.23
SUPT4H1P63272 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT4H1P63272 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.52■□□□□ 0.23
SUPT4H1P63272 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.23
SUPT4H1P63272 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SUPT4H1P63272 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SUPT4H1P63272 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SUPT4H1P63272 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SUPT4H1P63272 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SUPT4H1P63272 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SUPT4H1P63272 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SUPT4H1P63272 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SUPT4H1P63272 UNC93B3-201ENST00000308076 687 ntBASIC16.51■□□□□ 0.23
SUPT4H1P63272 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.51■□□□□ 0.23
SUPT4H1P63272 MIR572-201ENST00000384983 95 ntBASIC16.51■□□□□ 0.23
SUPT4H1P63272 AL356441.2-201ENST00000443009 864 ntBASIC16.51■□□□□ 0.23
SUPT4H1P63272 AC024257.2-201ENST00000549699 147 ntBASIC16.51■□□□□ 0.23
SUPT4H1P63272 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.51■□□□□ 0.23
SUPT4H1P63272 AC008764.7-201ENST00000593779 1081 ntBASIC16.51■□□□□ 0.23
SUPT4H1P63272 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.51■□□□□ 0.23
SUPT4H1P63272 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SUPT4H1P63272 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.51■□□□□ 0.23
SUPT4H1P63272 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SUPT4H1P63272 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.51■□□□□ 0.23
SUPT4H1P63272 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SUPT4H1P63272 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SUPT4H1P63272 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.51■□□□□ 0.23
SUPT4H1P63272 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SUPT4H1P63272 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SUPT4H1P63272 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SUPT4H1P63272 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SUPT4H1P63272 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SUPT4H1P63272 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SUPT4H1P63272 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SUPT4H1P63272 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.5■□□□□ 0.23
SUPT4H1P63272 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SUPT4H1P63272 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.5■□□□□ 0.23
SUPT4H1P63272 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SUPT4H1P63272 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms