Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 ECEL1P2-201ENST00000461596 1295 ntBASIC15.18■□□□□ 0.02
HIST1H2BCP62807 AP006261.1-201ENST00000584783 668 ntBASIC15.18■□□□□ 0.02
HIST1H2BCP62807 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST1H2BCP62807 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 AC060814.1-201ENST00000554326 538 ntBASIC15.17■□□□□ 0.02
HIST1H2BCP62807 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST1H2BCP62807 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HIST1H2BCP62807 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 AC092296.2-201ENST00000589470 999 ntBASIC15.15■□□□□ 0.02
HIST1H2BCP62807 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H2BCP62807 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms