Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 FITM1-202ENST00000559294 800 ntBASIC21.25■□□□□ 0.99
ERVFC1P60507 NAPSB-206ENST00000562112 1266 ntBASIC21.25■□□□□ 0.99
ERVFC1P60507 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.25■□□□□ 0.99
ERVFC1P60507 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.25■□□□□ 0.99
ERVFC1P60507 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERVFC1P60507 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ERVFC1P60507 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.25■□□□□ 0.99
ERVFC1P60507 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.25■□□□□ 0.99
ERVFC1P60507 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERVFC1P60507 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERVFC1P60507 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ERVFC1P60507 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERVFC1P60507 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.24■□□□□ 0.99
ERVFC1P60507 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERVFC1P60507 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ERVFC1P60507 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ERVFC1P60507 NIFKP9-201ENST00000419265 221 ntBASIC21.24■□□□□ 0.99
ERVFC1P60507 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.24■□□□□ 0.99
ERVFC1P60507 KSR1P1-201ENST00000446298 240 ntBASIC21.24■□□□□ 0.99
ERVFC1P60507 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.24■□□□□ 0.99
ERVFC1P60507 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.24■□□□□ 0.99
ERVFC1P60507 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERVFC1P60507 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.24■□□□□ 0.99
ERVFC1P60507 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.24■□□□□ 0.99
ERVFC1P60507 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ERVFC1P60507 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERVFC1P60507 TERF1P1-201ENST00000311003 1181 ntBASIC21.23■□□□□ 0.99
ERVFC1P60507 HLA-G-202ENST00000376815 851 ntBASIC21.23■□□□□ 0.99
ERVFC1P60507 HLA-G-203ENST00000376818 1127 ntBASIC21.23■□□□□ 0.99
ERVFC1P60507 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.23■□□□□ 0.99
ERVFC1P60507 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.23■□□□□ 0.99
ERVFC1P60507 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERVFC1P60507 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.23■□□□□ 0.99
ERVFC1P60507 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.23■□□□□ 0.99
ERVFC1P60507 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.23■□□□□ 0.99
ERVFC1P60507 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ERVFC1P60507 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERVFC1P60507 Z98882.1-201ENST00000622160 2253 ntBASIC21.23■□□□□ 0.99
ERVFC1P60507 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERVFC1P60507 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.23■□□□□ 0.99
ERVFC1P60507 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERVFC1P60507 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERVFC1P60507 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.22■□□□□ 0.99
ERVFC1P60507 AC073508.3-201ENST00000619697 1419 ntBASIC21.22■□□□□ 0.99
ERVFC1P60507 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.22■□□□□ 0.99
ERVFC1P60507 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ERVFC1P60507 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.22■□□□□ 0.99
ERVFC1P60507 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.22■□□□□ 0.99
ERVFC1P60507 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERVFC1P60507 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.22■□□□□ 0.99
ERVFC1P60507 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.22■□□□□ 0.99
ERVFC1P60507 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.22■□□□□ 0.99
ERVFC1P60507 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERVFC1P60507 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERVFC1P60507 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.22■□□□□ 0.99
ERVFC1P60507 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ERVFC1P60507 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
ERVFC1P60507 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERVFC1P60507 KRT18P22-201ENST00000402024 1347 ntBASIC21.22■□□□□ 0.99
ERVFC1P60507 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERVFC1P60507 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERVFC1P60507 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERVFC1P60507 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 KRT16P1-201ENST00000399124 1418 ntBASIC21.21■□□□□ 0.99
ERVFC1P60507 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 AC121338.2-201ENST00000622535 1744 ntBASIC21.21■□□□□ 0.99
ERVFC1P60507 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.21■□□□□ 0.99
ERVFC1P60507 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.21■□□□□ 0.99
ERVFC1P60507 AL137013.1-201ENST00000432946 1228 ntBASIC21.21■□□□□ 0.99
ERVFC1P60507 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.21■□□□□ 0.99
ERVFC1P60507 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.21■□□□□ 0.99
ERVFC1P60507 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.21■□□□□ 0.99
ERVFC1P60507 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.21■□□□□ 0.99
ERVFC1P60507 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.21■□□□□ 0.99
ERVFC1P60507 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.21■□□□□ 0.99
ERVFC1P60507 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERVFC1P60507 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.21■□□□□ 0.99
ERVFC1P60507 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERVFC1P60507 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERVFC1P60507 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERVFC1P60507 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERVFC1P60507 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.2■□□□□ 0.98
ERVFC1P60507 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.2■□□□□ 0.98
ERVFC1P60507 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERVFC1P60507 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.2■□□□□ 0.98
ERVFC1P60507 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.2■□□□□ 0.98
ERVFC1P60507 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.2■□□□□ 0.98
ERVFC1P60507 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.2■□□□□ 0.98
ERVFC1P60507 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERVFC1P60507 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERVFC1P60507 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms