Protein–RNA interactions for Protein: P57743

LSM3, U6 snRNA-associated Sm-like protein LSm3, yeastyeast

Known RBP Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM3P57743 YOL029CYOL029C 606 nt-0.02□□□□□ -2.41
LSM3P57743 CUL3YGR003W 2235 nt-0.02□□□□□ -2.41
LSM3P57743 YDR029WYDR029W 315 nt-0.03□□□□□ -2.41
LSM3P57743 OLI1Q0130 231 nt-0.03□□□□□ -2.41
LSM3P57743 RPS27AYKL156W 249 nt-0.03□□□□□ -2.41
LSM3P57743 YKL202WYKL202W 582 nt-0.03□□□□□ -2.41
LSM3P57743 YIL066W-AYIL066W-A 444 nt-0.04□□□□□ -2.42
LSM3P57743 PRP21YJL203W 843 nt-0.04□□□□□ -2.42
LSM3P57743 YKL068W-AYKL068W-A 237 nt-0.04□□□□□ -2.42
LSM3P57743 YBL008W-AYBL008W-A 240 nt-0.04□□□□□ -2.42
LSM3P57743 snR45snR45 172 nt-0.04□□□□□ -2.42
LSM3P57743 YIR018C-AYIR018C-A 138 nt-0.05□□□□□ -2.42
LSM3P57743 YIR044CYIR044C 186 nt-0.05□□□□□ -2.42
LSM3P57743 IPP1YBR011C 864 nt-0.05□□□□□ -2.42
LSM3P57743 YGR025WYGR025W 303 nt-0.06□□□□□ -2.42
LSM3P57743 YKL044WYKL044W 321 nt-0.06□□□□□ -2.42
LSM3P57743 YLR198CYLR198C 360 nt-0.06□□□□□ -2.42
LSM3P57743 PBI2YNL015W 228 nt-0.06□□□□□ -2.42
LSM3P57743 YOR053WYOR053W 342 nt-0.06□□□□□ -2.42
LSM3P57743 YPL182CYPL182C 384 nt-0.06□□□□□ -2.42
LSM3P57743 ASE1YOR058C 2658 nt-0.06□□□□□ -2.42
LSM3P57743 PRP42YDR235W 1635 nt-0.06□□□□□ -2.42
LSM3P57743 SEC8YPR055W 3198 nt-0.07□□□□□ -2.42
LSM3P57743 YAP6YDR259C 1152 nt-0.07□□□□□ -2.42
LSM3P57743 COX5BYIL111W 456 nt-0.07□□□□□ -2.42
LSM3P57743 PRP5YBR237W 2550 nt-0.08□□□□□ -2.42
LSM3P57743 snR72snR72 98 nt-0.08□□□□□ -2.42
LSM3P57743 OST4YDL232W 111 nt-0.09□□□□□ -2.42
LSM3P57743 PAA1YDR071C 576 nt-0.09□□□□□ -2.42
LSM3P57743 YPR160W-AYPR160W-A 81 nt-0.09□□□□□ -2.42
LSM3P57743 HAL9YOL089C 3093 nt-0.09□□□□□ -2.42
LSM3P57743 EMC4YGL231C 573 nt-0.1□□□□□ -2.43
LSM3P57743 RCO1YMR075W 2055 nt-0.1□□□□□ -2.43
LSM3P57743 SVS1YPL163C 783 nt-0.11□□□□□ -2.43
LSM3P57743 YFR012W-AYFR012W-A 87 nt-0.12□□□□□ -2.43
LSM3P57743 YAL067W-AYAL067W-A 228 nt-0.12□□□□□ -2.43
LSM3P57743 TSC3YBR058C-A 243 nt-0.12□□□□□ -2.43
LSM3P57743 snR190snR190 190 nt-0.12□□□□□ -2.43
LSM3P57743 YBR206WYBR206W 324 nt-0.12□□□□□ -2.43
LSM3P57743 ORC3YLL004W 1851 nt-0.12□□□□□ -2.43
LSM3P57743 COG8YML071C 1824 nt-0.13□□□□□ -2.43
LSM3P57743 SPO21YOL091W 1830 nt-0.13□□□□□ -2.43
LSM3P57743 TIM13YGR181W 318 nt-0.13□□□□□ -2.43
LSM3P57743 YKL023C-AYKL023C-A 228 nt-0.13□□□□□ -2.43
LSM3P57743 snR51snR51 107 nt-0.13□□□□□ -2.43
LSM3P57743 YDR371C-AYDR371C-A 105 nt-0.14□□□□□ -2.43
LSM3P57743 YLR399W-AYLR399W-A 105 nt-0.14□□□□□ -2.43
LSM3P57743 BER1YLR412W 825 nt-0.14□□□□□ -2.43
LSM3P57743 DCP1YOL149W 696 nt-0.14□□□□□ -2.43
LSM3P57743 SNU56YDR240C 1479 nt-0.15□□□□□ -2.43
LSM3P57743 PRP39YML046W 1890 nt-0.16□□□□□ -2.43
LSM3P57743 PTP2YOR208W 2253 nt-0.16□□□□□ -2.43
LSM3P57743 HMLALPHA2YCL067C 633 nt-0.16□□□□□ -2.44
LSM3P57743 MATALPHA2YCR039C 633 nt-0.16□□□□□ -2.44
LSM3P57743 RPL35AYDL191W 363 nt-0.16□□□□□ -2.44
LSM3P57743 SSS1YDR086C 243 nt-0.16□□□□□ -2.44
LSM3P57743 YML108WYML108W 318 nt-0.16□□□□□ -2.44
LSM3P57743 MRPL50YNR022C 420 nt-0.16□□□□□ -2.44
LSM3P57743 YDL016CYDL016C 303 nt-0.17□□□□□ -2.44
LSM3P57743 YLR232WYLR232W 348 nt-0.17□□□□□ -2.44
LSM3P57743 UTP8YGR128C 2142 nt-0.17□□□□□ -2.44
LSM3P57743 YCR001WYCR001W 315 nt-0.18□□□□□ -2.44
LSM3P57743 RPS26AYGL189C 360 nt-0.18□□□□□ -2.44
LSM3P57743 RPS20YHL015W 366 nt-0.18□□□□□ -2.44
LSM3P57743 YJR011CYJR011C 786 nt-0.18□□□□□ -2.44
LSM3P57743 YOR186C-AYOR186C-A 210 nt-0.18□□□□□ -2.44
LSM3P57743 SDH7YDR511W 402 nt-0.19□□□□□ -2.44
LSM3P57743 MAM33YIL070C 801 nt-0.19□□□□□ -2.44
LSM3P57743 LEE1YPL054W 906 nt-0.19□□□□□ -2.44
LSM3P57743 GRX5YPL059W 453 nt-0.19□□□□□ -2.44
LSM3P57743 SEM1YDR363W-A 270 nt-0.2□□□□□ -2.44
LSM3P57743 ULI1YFR026C 510 nt-0.2□□□□□ -2.44
LSM3P57743 YJR141WYJR141W 1044 nt-0.2□□□□□ -2.44
LSM3P57743 NFU1YKL040C 771 nt-0.2□□□□□ -2.44
LSM3P57743 YAR053WYAR053W 297 nt-0.2□□□□□ -2.44
LSM3P57743 YHL046W-AYHL046W-A 327 nt-0.21□□□□□ -2.44
LSM3P57743 YFR009W-AYFR009W-A 258 nt-0.22□□□□□ -2.44
LSM3P57743 YNL211CYNL211C 261 nt-0.22□□□□□ -2.44
LSM3P57743 YLR171WYLR171W 390 nt-0.23□□□□□ -2.45
LSM3P57743 YNL146WYNL146W 303 nt-0.23□□□□□ -2.45
LSM3P57743 YOR345CYOR345C 351 nt-0.23□□□□□ -2.45
LSM3P57743 NIP100YPL174C 2607 nt-0.23□□□□□ -2.45
LSM3P57743 NNF2YGR089W 2811 nt-0.23□□□□□ -2.45
LSM3P57743 YJL047C-AYJL047C-A 135 nt-0.24□□□□□ -2.45
LSM3P57743 ATG31YDR022C 591 nt-0.25□□□□□ -2.45
LSM3P57743 YJL020W-AYJL020W-A 258 nt-0.25□□□□□ -2.45
LSM3P57743 YDL011CYDL011C 324 nt-0.26□□□□□ -2.45
LSM3P57743 YNL058CYNL058C 951 nt-0.26□□□□□ -2.45
LSM3P57743 RPF1YHR088W 888 nt-0.28□□□□□ -2.45
LSM3P57743 NIP1YMR309C 2439 nt-0.28□□□□□ -2.45
LSM3P57743 YHL041WYHL041W 450 nt-0.3□□□□□ -2.46
LSM3P57743 YBL071CYBL071C 309 nt-0.3□□□□□ -2.46
LSM3P57743 SOV1YMR066W 2697 nt-0.31□□□□□ -2.46
LSM3P57743 YKU70YMR284W 1809 nt-0.31□□□□□ -2.46
LSM3P57743 TFB5YDR079C-A 219 nt-0.31□□□□□ -2.46
LSM3P57743 CSE1YGL238W 2883 nt-0.31□□□□□ -2.46
LSM3P57743 MYO1YHR023W 5787 nt-0.32□□□□□ -2.46
LSM3P57743 YPL229WYPL229W 621 nt-0.32□□□□□ -2.46
LSM3P57743 COY1YKL179C 2040 nt-0.33□□□□□ -2.46
LSM3P57743 tN(GUU)QtN(GUU)Q 71 nt-0.33□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 191 ms