Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PDE1AP54750 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PDE1AP54750 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC24.56■■□□□ 1.52
PDE1AP54750 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PDE1AP54750 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
PDE1AP54750 LBX2-AS1-202ENST00000603175 2083 ntBASIC24.55■■□□□ 1.52
PDE1AP54750 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
PDE1AP54750 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PDE1AP54750 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.55■■□□□ 1.52
PDE1AP54750 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.55■■□□□ 1.52
PDE1AP54750 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.55■■□□□ 1.52
PDE1AP54750 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.55■■□□□ 1.52
PDE1AP54750 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.55■■□□□ 1.52
PDE1AP54750 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PDE1AP54750 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PDE1AP54750 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PDE1AP54750 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
PDE1AP54750 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDE1AP54750 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDE1AP54750 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
PDE1AP54750 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDE1AP54750 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.54■■□□□ 1.52
PDE1AP54750 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
PDE1AP54750 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC24.54■■□□□ 1.52
PDE1AP54750 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDE1AP54750 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
PDE1AP54750 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDE1AP54750 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDE1AP54750 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.54■■□□□ 1.52
PDE1AP54750 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.54■■□□□ 1.52
PDE1AP54750 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDE1AP54750 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PDE1AP54750 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDE1AP54750 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDE1AP54750 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PDE1AP54750 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PDE1AP54750 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDE1AP54750 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PDE1AP54750 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
PDE1AP54750 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.53■■□□□ 1.52
PDE1AP54750 AC090192.1-201ENST00000517740 490 ntBASIC24.53■■□□□ 1.52
PDE1AP54750 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.53■■□□□ 1.52
PDE1AP54750 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.53■■□□□ 1.52
PDE1AP54750 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.53■■□□□ 1.52
PDE1AP54750 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.53■■□□□ 1.52
PDE1AP54750 AC092118.2-201ENST00000613495 667 ntBASIC24.53■■□□□ 1.52
PDE1AP54750 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.53■■□□□ 1.52
PDE1AP54750 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.53■■□□□ 1.52
PDE1AP54750 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
PDE1AP54750 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDE1AP54750 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDE1AP54750 KRT8P20-201ENST00000423953 1409 ntBASIC24.52■■□□□ 1.52
PDE1AP54750 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PDE1AP54750 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDE1AP54750 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PDE1AP54750 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDE1AP54750 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.52■■□□□ 1.52
PDE1AP54750 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDE1AP54750 MOK-225ENST00000522867 1883 ntTSL 5 BASIC24.52■■□□□ 1.52
PDE1AP54750 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.52■■□□□ 1.52
PDE1AP54750 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.52■■□□□ 1.52
PDE1AP54750 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PDE1AP54750 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.52■■□□□ 1.52
PDE1AP54750 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
PDE1AP54750 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.52■■□□□ 1.52
PDE1AP54750 AC023632.3-201ENST00000521633 145 ntBASIC24.52■■□□□ 1.52
PDE1AP54750 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PDE1AP54750 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDE1AP54750 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDE1AP54750 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDE1AP54750 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDE1AP54750 AC125437.2-201ENST00000625180 2167 ntBASIC24.52■■□□□ 1.52
PDE1AP54750 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.51■■□□□ 1.51
PDE1AP54750 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 DUSP5P2-201ENST00000426873 1033 ntBASIC24.51■■□□□ 1.51
PDE1AP54750 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.51■■□□□ 1.51
PDE1AP54750 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.51■■□□□ 1.51
PDE1AP54750 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PDE1AP54750 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDE1AP54750 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.51■■□□□ 1.51
PDE1AP54750 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.51■■□□□ 1.51
PDE1AP54750 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.51■■□□□ 1.51
PDE1AP54750 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.5■■□□□ 1.51
PDE1AP54750 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.5■■□□□ 1.51
PDE1AP54750 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.5■■□□□ 1.51
PDE1AP54750 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.5■■□□□ 1.51
PDE1AP54750 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms