Protein–RNA interactions for Protein: P53899

CUZ1, CDC48-associated ubiquitin-like/zinc finger protein 1, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUZ1P53899 YDR365W-BYDR365W-B 5268 nt2.55□□□□□ -2
CUZ1P53899 YER138CYER138C 5268 nt2.55□□□□□ -2
CUZ1P53899 YER160CYER160C 5268 nt2.55□□□□□ -2
CUZ1P53899 YGR038C-BYGR038C-B 5268 nt2.55□□□□□ -2
CUZ1P53899 YGR161C-DYGR161C-D 5268 nt2.55□□□□□ -2
CUZ1P53899 YJR027WYJR027W 5268 nt2.55□□□□□ -2
CUZ1P53899 YLR157C-BYLR157C-B 5268 nt2.55□□□□□ -2
CUZ1P53899 YML039WYML039W 5268 nt2.55□□□□□ -2
CUZ1P53899 YML045WYML045W 5268 nt2.55□□□□□ -2
CUZ1P53899 YMR050CYMR050C 5268 nt2.55□□□□□ -2
CUZ1P53899 YOL103W-BYOL103W-B 5268 nt2.55□□□□□ -2
CUZ1P53899 YBR012W-BYBR012W-B 5271 nt2.55□□□□□ -2
CUZ1P53899 YOR142W-BYOR142W-B 5268 nt2.55□□□□□ -2
CUZ1P53899 YPL257W-BYPL257W-B 5268 nt2.55□□□□□ -2
CUZ1P53899 YPR158W-BYPR158W-B 5271 nt2.55□□□□□ -2
CUZ1P53899 RPN1YHR027C 2982 nt2.54□□□□□ -2
CUZ1P53899 COG4YPR105C 2586 nt2.54□□□□□ -2
CUZ1P53899 YBL100W-CYBL100W-C 120 nt2.54□□□□□ -2
CUZ1P53899 SMC6YLR383W 3345 nt2.54□□□□□ -2
CUZ1P53899 MMS1YPR164W 4224 nt2.53□□□□□ -2
CUZ1P53899 BUB1YGR188C 3066 nt2.53□□□□□ -2
CUZ1P53899 SAP185YJL098W 3177 nt2.53□□□□□ -2
CUZ1P53899 EAF1YDR359C 2949 nt2.53□□□□□ -2
CUZ1P53899 SEC1YDR164C 2175 nt2.52□□□□□ -2.01
CUZ1P53899 YDL206WYDL206W 2289 nt2.52□□□□□ -2.01
CUZ1P53899 IST2YBR086C 2841 nt2.51□□□□□ -2.01
CUZ1P53899 JSN1YJR091C 3276 nt2.51□□□□□ -2.01
CUZ1P53899 UFD2YDL190C 2886 nt2.51□□□□□ -2.01
CUZ1P53899 YDR210WYDR210W 228 nt2.51□□□□□ -2.01
CUZ1P53899 COX5BYIL111W 456 nt2.51□□□□□ -2.01
CUZ1P53899 YJL127W-AYJL127W-A 117 nt2.51□□□□□ -2.01
CUZ1P53899 SPO71YDR104C 3738 nt2.51□□□□□ -2.01
CUZ1P53899 RSE1YML049C 4086 nt2.51□□□□□ -2.01
CUZ1P53899 SGM1YJR134C 2124 nt2.5□□□□□ -2.01
CUZ1P53899 YGR240C-AYGR240C-A 201 nt2.5□□□□□ -2.01
CUZ1P53899 YKL100W-AYKL100W-A 90 nt2.5□□□□□ -2.01
CUZ1P53899 YOL164W-AYOL164W-A 183 nt2.49□□□□□ -2.01
CUZ1P53899 MSH5YDL154W 2706 nt2.49□□□□□ -2.01
CUZ1P53899 MSB2YGR014W 3921 nt2.49□□□□□ -2.01
CUZ1P53899 MDS3YGL197W 4464 nt2.49□□□□□ -2.01
CUZ1P53899 BUD2YKL092C 3315 nt2.48□□□□□ -2.01
CUZ1P53899 YPL216WYPL216W 3309 nt2.48□□□□□ -2.01
CUZ1P53899 YOR161W-AYOR161W-A 81 nt2.48□□□□□ -2.01
CUZ1P53899 ECM29YHL030W 5607 nt2.48□□□□□ -2.01
CUZ1P53899 SLI15YBR156C 2097 nt2.48□□□□□ -2.01
CUZ1P53899 TOM1YDR457W 9807 nt2.48□□□□□ -2.01
CUZ1P53899 SSN2YDR443C 4263 nt2.48□□□□□ -2.01
CUZ1P53899 CYR1YJL005W 6081 nt2.47□□□□□ -2.01
CUZ1P53899 SCP160YJL080C 3669 nt2.47□□□□□ -2.01
CUZ1P53899 VPS8YAL002W 3825 nt2.46□□□□□ -2.02
CUZ1P53899 RPS26AYGL189C 360 nt2.46□□□□□ -2.02
CUZ1P53899 YMR175W-AYMR175W-A 195 nt2.46□□□□□ -2.02
CUZ1P53899 RAX2YLR084C 3663 nt2.46□□□□□ -2.02
CUZ1P53899 TCB2YNL087W 3537 nt2.46□□□□□ -2.02
CUZ1P53899 RTT107YHR154W 3213 nt2.46□□□□□ -2.02
CUZ1P53899 YJR039WYJR039W 3366 nt2.46□□□□□ -2.02
CUZ1P53899 MOT1YPL082C 5604 nt2.45□□□□□ -2.02
CUZ1P53899 SEC7YDR170C 6030 nt2.45□□□□□ -2.02
CUZ1P53899 FYV10YIL097W 1551 nt2.45□□□□□ -2.02
CUZ1P53899 TBS1YBR150C 3285 nt2.45□□□□□ -2.02
CUZ1P53899 ADR1YDR216W 3972 nt2.44□□□□□ -2.02
CUZ1P53899 MRD1YPR112C 2664 nt2.44□□□□□ -2.02
CUZ1P53899 YLR278CYLR278C 4026 nt2.43□□□□□ -2.02
CUZ1P53899 AGC1YPR021C 2709 nt2.43□□□□□ -2.02
CUZ1P53899 GLG1YKR058W 1851 nt2.43□□□□□ -2.02
CUZ1P53899 TOR1YJR066W 7413 nt2.43□□□□□ -2.02
CUZ1P53899 AMS1YGL156W 3252 nt2.43□□□□□ -2.02
CUZ1P53899 snR64snR64 101 nt2.42□□□□□ -2.02
CUZ1P53899 YGR146C-AYGR146C-A 162 nt2.42□□□□□ -2.02
CUZ1P53899 ESL1YIL151C 3357 nt2.42□□□□□ -2.02
CUZ1P53899 RSM22YKL155C 1887 nt2.41□□□□□ -2.02
CUZ1P53899 RTP1YMR185W 2946 nt2.41□□□□□ -2.02
CUZ1P53899 snR70snR70 164 nt2.41□□□□□ -2.02
CUZ1P53899 YLR232WYLR232W 348 nt2.41□□□□□ -2.02
CUZ1P53899 BCK1YJL095W 4437 nt2.4□□□□□ -2.03
CUZ1P53899 NUP100YKL068W 2880 nt2.4□□□□□ -2.03
CUZ1P53899 POL5YEL055C 3069 nt2.4□□□□□ -2.03
CUZ1P53899 DNA2YHR164C 4569 nt2.39□□□□□ -2.03
CUZ1P53899 TAO3YIL129C 7131 nt2.39□□□□□ -2.03
CUZ1P53899 tW(CCA)G1tW(CCA)G1 72 nt2.39□□□□□ -2.03
CUZ1P53899 tW(CCA)G2tW(CCA)G2 72 nt2.39□□□□□ -2.03
CUZ1P53899 tW(CCA)JtW(CCA)J 72 nt2.39□□□□□ -2.03
CUZ1P53899 tW(CCA)KtW(CCA)K 72 nt2.39□□□□□ -2.03
CUZ1P53899 tW(CCA)MtW(CCA)M 72 nt2.39□□□□□ -2.03
CUZ1P53899 tW(CCA)PtW(CCA)P 72 nt2.39□□□□□ -2.03
CUZ1P53899 MET18YIL128W 3099 nt2.39□□□□□ -2.03
CUZ1P53899 CAF120YNL278W 3183 nt2.39□□□□□ -2.03
CUZ1P53899 FKS3YMR306W 5358 nt2.38□□□□□ -2.03
CUZ1P53899 PNC1YGL037C 651 nt2.38□□□□□ -2.03
CUZ1P53899 YBR109W-AYBR109W-A 225 nt2.38□□□□□ -2.03
CUZ1P53899 AXL1YPR122W 3627 nt2.38□□□□□ -2.03
CUZ1P53899 SEC26YDR238C 2922 nt2.38□□□□□ -2.03
CUZ1P53899 FRK1YPL141C 2598 nt2.37□□□□□ -2.03
CUZ1P53899 YBR196C-AYBR196C-A 150 nt2.37□□□□□ -2.03
CUZ1P53899 snR47snR47 99 nt2.37□□□□□ -2.03
CUZ1P53899 snR50snR50 90 nt2.37□□□□□ -2.03
CUZ1P53899 NUP157YER105C 4176 nt2.36□□□□□ -2.03
CUZ1P53899 YER172C-AYER172C-A 381 nt2.36□□□□□ -2.03
CUZ1P53899 YML002WYML002W 2214 nt2.36□□□□□ -2.03
CUZ1P53899 NUM1YDR150W 8247 nt2.35□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms