Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.23■□□□□ 0.83
LIMK2P53671 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.23■□□□□ 0.83
LIMK2P53671 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIMK2P53671 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.22■□□□□ 0.83
LIMK2P53671 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.22■□□□□ 0.83
LIMK2P53671 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LIMK2P53671 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.22■□□□□ 0.83
LIMK2P53671 AC016405.3-201ENST00000607710 860 ntBASIC20.22■□□□□ 0.83
LIMK2P53671 FAM21FP-204ENST00000608637 956 ntBASIC20.22■□□□□ 0.83
LIMK2P53671 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.22■□□□□ 0.83
LIMK2P53671 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LIMK2P53671 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
LIMK2P53671 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LIMK2P53671 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.22■□□□□ 0.83
LIMK2P53671 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.22■□□□□ 0.83
LIMK2P53671 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIMK2P53671 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.21■□□□□ 0.83
LIMK2P53671 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.21■□□□□ 0.83
LIMK2P53671 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LIMK2P53671 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.21■□□□□ 0.83
LIMK2P53671 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIMK2P53671 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.21■□□□□ 0.83
LIMK2P53671 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LIMK2P53671 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LIMK2P53671 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
LIMK2P53671 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIMK2P53671 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.21■□□□□ 0.83
LIMK2P53671 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.21■□□□□ 0.83
LIMK2P53671 AC093787.1-201ENST00000450396 207 ntBASIC20.21■□□□□ 0.83
LIMK2P53671 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.21■□□□□ 0.83
LIMK2P53671 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.21■□□□□ 0.83
LIMK2P53671 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.21■□□□□ 0.83
LIMK2P53671 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.21■□□□□ 0.83
LIMK2P53671 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.21■□□□□ 0.83
LIMK2P53671 AL162412.1-201ENST00000567129 965 ntBASIC20.21■□□□□ 0.83
LIMK2P53671 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIMK2P53671 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIMK2P53671 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.21■□□□□ 0.83
LIMK2P53671 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIMK2P53671 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LIMK2P53671 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIMK2P53671 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LIMK2P53671 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LIMK2P53671 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIMK2P53671 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.2■□□□□ 0.82
LIMK2P53671 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.2■□□□□ 0.82
LIMK2P53671 DPP3P2-201ENST00000416030 1696 ntBASIC20.2■□□□□ 0.82
LIMK2P53671 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LIMK2P53671 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.2■□□□□ 0.82
LIMK2P53671 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.2■□□□□ 0.82
LIMK2P53671 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LIMK2P53671 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.2■□□□□ 0.82
LIMK2P53671 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.2■□□□□ 0.82
LIMK2P53671 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.2■□□□□ 0.82
LIMK2P53671 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.2■□□□□ 0.82
LIMK2P53671 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.2■□□□□ 0.82
LIMK2P53671 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LIMK2P53671 AL591742.1-201ENST00000604433 565 ntBASIC20.2■□□□□ 0.82
LIMK2P53671 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.2■□□□□ 0.82
LIMK2P53671 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LIMK2P53671 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LIMK2P53671 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIMK2P53671 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.2■□□□□ 0.82
LIMK2P53671 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LIMK2P53671 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.2■□□□□ 0.82
LIMK2P53671 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LIMK2P53671 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.2■□□□□ 0.82
LIMK2P53671 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.2■□□□□ 0.82
LIMK2P53671 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LIMK2P53671 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.19■□□□□ 0.82
LIMK2P53671 CDV3P1-201ENST00000471403 739 ntBASIC20.19■□□□□ 0.82
LIMK2P53671 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIMK2P53671 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.19■□□□□ 0.82
LIMK2P53671 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.19■□□□□ 0.82
LIMK2P53671 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms