Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 IFH1YLR223C 3258 nt2.58□□□□□ -2
NRD1P53617 NEW1YPL226W 3591 nt2.57□□□□□ -2
NRD1P53617 YPP1YGR198W 2454 nt2.57□□□□□ -2
NRD1P53617 RPO41YFL036W 4056 nt2.56□□□□□ -2
NRD1P53617 FKS3YMR306W 5358 nt2.56□□□□□ -2
NRD1P53617 YJL127W-AYJL127W-A 117 nt2.56□□□□□ -2
NRD1P53617 RTT10YPL183C 3042 nt2.56□□□□□ -2
NRD1P53617 SLN1YIL147C 3663 nt2.55□□□□□ -2
NRD1P53617 NFT1YKR103W 3657 nt2.55□□□□□ -2
NRD1P53617 INP53YOR109W 3324 nt2.55□□□□□ -2
NRD1P53617 YBR196C-AYBR196C-A 150 nt2.55□□□□□ -2
NRD1P53617 JSN1YJR091C 3276 nt2.54□□□□□ -2
NRD1P53617 SMC2YFR031C 3513 nt2.54□□□□□ -2
NRD1P53617 BUB1YGR188C 3066 nt2.54□□□□□ -2
NRD1P53617 SWR1YDR334W 4545 nt2.54□□□□□ -2
NRD1P53617 ESL2YKR096W 3588 nt2.54□□□□□ -2
NRD1P53617 CAF120YNL278W 3183 nt2.53□□□□□ -2
NRD1P53617 YDR209CYDR209C 414 nt2.53□□□□□ -2
NRD1P53617 YOR055WYOR055W 435 nt2.53□□□□□ -2
NRD1P53617 NAM7YMR080C 2916 nt2.53□□□□□ -2
NRD1P53617 ALK1YGL021W 2283 nt2.53□□□□□ -2
NRD1P53617 DNL4YOR005C 2835 nt2.53□□□□□ -2
NRD1P53617 TAH1YCR060W 336 nt2.52□□□□□ -2.01 RIP-Chip
NRD1P53617 NET1YJL076W 3570 nt2.52□□□□□ -2.01
NRD1P53617 SRO77YBL106C 3033 nt2.52□□□□□ -2.01
NRD1P53617 YDR186CYDR186C 2634 nt2.52□□□□□ -2.01
NRD1P53617 EAF1YDR359C 2949 nt2.52□□□□□ -2.01
NRD1P53617 PDR3YBL005W 2931 nt2.52□□□□□ -2.01
NRD1P53617 NPR3YHL023C 3441 nt2.5□□□□□ -2.01
NRD1P53617 YGR122C-AYGR122C-A 129 nt2.5□□□□□ -2.01 RIP-Chip
NRD1P53617 MMS1YPR164W 4224 nt2.5□□□□□ -2.01
NRD1P53617 ATG11YPR049C 3537 nt2.5□□□□□ -2.01
NRD1P53617 NUM1YDR150W 8247 nt2.49□□□□□ -2.01
NRD1P53617 ARP8YOR141C 2646 nt2.49□□□□□ -2.01
NRD1P53617 SNC1YAL030W 354 nt2.49□□□□□ -2.01 RIP-Chip
NRD1P53617 YMR242W-AYMR242W-A 90 nt2.49□□□□□ -2.01
NRD1P53617 DSE4YNR067C 3354 nt2.49□□□□□ -2.01
NRD1P53617 BNR1YIL159W 4128 nt2.48□□□□□ -2.01
NRD1P53617 NUP157YER105C 4176 nt2.48□□□□□ -2.01
NRD1P53617 EMC5YIL027C 426 nt2.47□□□□□ -2.01 RIP-Chip
NRD1P53617 RGA2YDR379W 3030 nt2.47□□□□□ -2.01
NRD1P53617 YBL005W-BYBL005W-B 5268 nt2.47□□□□□ -2.01
NRD1P53617 RGR1YLR071C 3249 nt2.47□□□□□ -2.01
NRD1P53617 PHO91YNR013C 2685 nt2.46□□□□□ -2.02
NRD1P53617 SKI7YOR076C 2244 nt2.46□□□□□ -2.02
NRD1P53617 CRS5YOR031W 210 nt2.45□□□□□ -2.02
NRD1P53617 MSB1YOR188W 3414 nt2.45□□□□□ -2.02
NRD1P53617 SIN3YOL004W 4611 nt2.45□□□□□ -2.02
NRD1P53617 PSK2YOL045W 3306 nt2.44□□□□□ -2.02
NRD1P53617 MRD1YPR112C 2664 nt2.44□□□□□ -2.02
NRD1P53617 YGR146C-AYGR146C-A 162 nt2.44□□□□□ -2.02
NRD1P53617 UBP3YER151C 2739 nt2.44□□□□□ -2.02
NRD1P53617 PTP2YOR208W 2253 nt2.43□□□□□ -2.02
NRD1P53617 NOP10YHR072W-A 177 nt2.43□□□□□ -2.02
NRD1P53617 PAU8YAL068C 363 nt2.43□□□□□ -2.02
NRD1P53617 PAU18YLL064C 363 nt2.43□□□□□ -2.02
NRD1P53617 PAU6YNR076W 363 nt2.43□□□□□ -2.02
NRD1P53617 PAU20YOL161C 363 nt2.43□□□□□ -2.02
NRD1P53617 YGR109W-BYGR109W-B 4644 nt2.43□□□□□ -2.02
NRD1P53617 PSK1YAL017W 4071 nt2.42□□□□□ -2.02
NRD1P53617 DGR2YKL121W 2559 nt2.42□□□□□ -2.02
NRD1P53617 RPL37BYDR500C 267 nt2.42□□□□□ -2.02
NRD1P53617 DUG2YBR281C 2637 nt2.42□□□□□ -2.02
NRD1P53617 POM152YMR129W 4014 nt2.42□□□□□ -2.02
NRD1P53617 PSY2YNL201C 2577 nt2.42□□□□□ -2.02
NRD1P53617 TAF2YCR042C 4224 nt2.41□□□□□ -2.02 RIP-Chip
NRD1P53617 UBP15YMR304W 3693 nt2.41□□□□□ -2.02
NRD1P53617 YGL123C-AYGL123C-A 231 nt2.41□□□□□ -2.02
NRD1P53617 PDR11YIL013C 4236 nt2.41□□□□□ -2.02
NRD1P53617 IRR1YIL026C 3453 nt2.41□□□□□ -2.02
NRD1P53617 RRP12YPL012W 3687 nt2.4□□□□□ -2.02
NRD1P53617 AI1Q0050 2505 nt2.4□□□□□ -2.02
NRD1P53617 VTC3YPL019C 2508 nt2.4□□□□□ -2.02
NRD1P53617 SGS1YMR190C 4344 nt2.4□□□□□ -2.02 RIP-Chip
NRD1P53617 COG4YPR105C 2586 nt2.4□□□□□ -2.02
NRD1P53617 TIM9YEL020W-A 264 nt2.4□□□□□ -2.03
NRD1P53617 KTI11YBL071W-A 249 nt2.4□□□□□ -2.03 RIP-Chip
NRD1P53617 TRA1YHR099W 11235 nt2.4□□□□□ -2.03
NRD1P53617 PET111YMR257C 2403 nt2.4□□□□□ -2.03
NRD1P53617 YBT1YLL048C 4986 nt2.4□□□□□ -2.03
NRD1P53617 MDS3YGL197W 4464 nt2.4□□□□□ -2.03
NRD1P53617 STB4YMR019W 2850 nt2.39□□□□□ -2.03
NRD1P53617 NAB6YML117W 3405 nt2.39□□□□□ -2.03
NRD1P53617 AFI1YOR129C 2682 nt2.39□□□□□ -2.03
NRD1P53617 SAP190YKR028W 3102 nt2.39□□□□□ -2.03
NRD1P53617 SCP160YJL080C 3669 nt2.39□□□□□ -2.03
NRD1P53617 snR76snR76 109 nt2.39□□□□□ -2.03
NRD1P53617 MGA2YIR033W 3342 nt2.39□□□□□ -2.03
NRD1P53617 snR38snR38 95 nt2.38□□□□□ -2.03
NRD1P53617 RPS29AYLR388W 171 nt2.37□□□□□ -2.03 RIP-Chip
NRD1P53617 YOR161W-AYOR161W-A 81 nt2.37□□□□□ -2.03
NRD1P53617 ENV11YGR071C 2583 nt2.37□□□□□ -2.03
NRD1P53617 SUL1YBR294W 2580 nt2.36□□□□□ -2.03
NRD1P53617 RIC1YLR039C 3171 nt2.35□□□□□ -2.03
NRD1P53617 YLR035C-AYLR035C-A 3468 nt2.35□□□□□ -2.03
NRD1P53617 SEC10YLR166C 2616 nt2.35□□□□□ -2.03
NRD1P53617 KCS1YDR017C 3153 nt2.35□□□□□ -2.03
NRD1P53617 RTP1YMR185W 2946 nt2.35□□□□□ -2.03
NRD1P53617 WAR1YML076C 2835 nt2.34□□□□□ -2.03
NRD1P53617 FIR1YER032W 2631 nt2.34□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 43.3 ms